LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu01g02447	ATGTTGGAGGCGGTAAAAGCCAAAATCAAATCTGCTAAATCAAAAGATGAGTCTGAATCTGTTAAATTTACTCAAAAGAATCTGATTAACAAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATCTGGATTGATGGAGGTACACCCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCGTATAGAATTGGTCAGGTGTTAGATGGCCATGAGAACACCTTAGCTGTGTCAAATAATCATCCATTGAGTAGCCCTGCAAAGCATACTACTATTGGGCATAGGCCTTCAAAGCAGAGAACTCTTGACCAGTTTGTCAGAAGATGTGATAACGTGGATAGGTCGGAAGTCGGAACATCAGCCTGA	561	0.4207	MLEAVKAKIKSAKSKDESESVKFTQKNLINKAGCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTPAASRQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQVLDGHENTLAVSNNHPLSSPAKHTTIGHRPSKQRTLDQFVRRCDNVDRSEVGTSA	186

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu01g02447	186	PANTHER	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1	7	132	IPR030101	GO:0006281\|GO:0031297\|GO:0036310
	Adu01g02447	186	Gene3D	-	3	143	IPR027417	-
	Adu01g02447	186	ProSiteProfiles	Superfamilies 1 and 2 helicase C-terminal domain profile.	24	178	IPR001650	-
	Adu01g02447	186	CDD	SF2_C_SNF	31	131	-	-
	Adu01g02447	186	SMART	helicmild6	47	130	IPR001650	-
	Adu01g02447	186	PANTHER	DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER	7	132	-	-
	Adu01g02447	186	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	27	144	IPR027417	-
	Adu01g02447	186	Pfam	Helicase conserved C-terminal domain	30	130	IPR001650	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu01g02447	Adu-Chr1	92379246	92381360	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu01g02447	6	131	RAD5 or RAD16-like Gene Family	AT1G05120	29.921	2.34e-14	68.6

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu01g02447	K14440		-	adu:107462099	248.054

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