Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02447 ATGTTGGAGGCGGTAAAAGCCAAAATCAAATCTGCTAAATCAAAAGATGAGTCTGAATCTGTTAAATTTACTCAAAAGAATCTGATTAACAAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATCTGGATTGATGGAGGTACACCCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCGTATAGAATTGGTCAGGTGTTAGATGGCCATGAGAACACCTTAGCTGTGTCAAATAATCATCCATTGAGTAGCCCTGCAAAGCATACTACTATTGGGCATAGGCCTTCAAAGCAGAGAACTCTTGACCAGTTTGTCAGAAGATGTGATAACGTGGATAGGTCGGAAGTCGGAACATCAGCCTGA 561 0.4207 MLEAVKAKIKSAKSKDESESVKFTQKNLINKAGCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTPAASRQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQVLDGHENTLAVSNNHPLSSPAKHTTIGHRPSKQRTLDQFVRRCDNVDRSEVGTSA 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02447 186 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1 7 132 IPR030101 GO:0006281|GO:0031297|GO:0036310
Adu01g02447 186 Gene3D - 3 143 IPR027417 -
Adu01g02447 186 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 24 178 IPR001650 -
Adu01g02447 186 CDD SF2_C_SNF 31 131 - -
Adu01g02447 186 SMART helicmild6 47 130 IPR001650 -
Adu01g02447 186 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 7 132 - -
Adu01g02447 186 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 144 IPR027417 -
Adu01g02447 186 Pfam Helicase conserved C-terminal domain 30 130 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02447 Adu-Chr1 92379246 92381360 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02447 6 131 RAD5 or RAD16-like Gene Family AT1G05120 29.921 2.34e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02447 K14440 - adu:107462099 248.054