Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02441 ATGTTGCAGGTTTCACATGCTAACTTCATCAAGAGTATTGAACTTTATATTTCTATTGAAAAATTTGAATTTTCCATAATTAGGGGCTATGTCTTTGACCTTGAACAAGTTCCTGCATACTCATGCTTTATAGGCTATGTTTCATGGCAGTTGGAGGTAGTAAAAGCCAAAATCAAGTCTGCTAAATCAAAAGATGAGTCTGAATCTCTTAAATTTACTCAAAAGAATCTGATTAACAAGGTCTATACTAATTCTGCAGATGCCAAGATTCCTGCTACTCTTGAGTATCTCGGAACTTTCATTGAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATCTGGATTGATGGAGGTACACTCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCAGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTGCAGAACAATCCTGGACTCCAAGTGACCTAATTCGGCCAATGATCGTGCTCATAGAATTGGCCAGGTCTCATCAGTAA 618 0.3883 MLQVSHANFIKSIELYISIEKFEFSIIRGYVFDLEQVPAYSCFIGYVSWQLEVVKAKIKSAKSKDESESLKFTQKNLINKVYTNSADAKIPATLEYLGTFIEAGCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTLAASRQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFAEQSWTPSDLIRPMIVLIELARSHQ 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02441 205 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1 50 191 IPR030101 GO:0006281|GO:0031297|GO:0036310
Adu01g02441 205 Gene3D - 46 194 IPR027417 -
Adu01g02441 205 SMART helicmild6 118 194 IPR001650 -
Adu01g02441 205 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 50 191 - -
Adu01g02441 205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 191 IPR027417 -
Adu01g02441 205 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 93 205 IPR001650 -
Adu01g02441 205 CDD SF2_C_SNF 87 188 - -
Adu01g02441 205 Pfam Helicase conserved C-terminal domain 93 191 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02441 Adu-Chr1 92216173 92218419 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02441 88 188 RAD5 or RAD16-like Gene Family AT5G22750 30.693 2.24e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02441 K14440 - adu:107485119 378.637