Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu01g02438 | ATGGATACAGAAGAAGAAAAACTCGATGCAAACTCAGATTCAACAAACAATTCCACAACAAAATTCCAGAATGTATCAACAATTTTAGATCCAGATTTTCAATTCCACATCCAGATAAAACCGCATCAGAGATATCTTCTTCAAGGAACAAATTCAACTGATTTGAAACACAAGCAACAAAAGGGGGAGAATGAACATGATGGTCATTCAGCCTATGGAAGTAGAACTGTTAGGGAACCTAGAGTTGTAGTTCAAACTACAAGCGAAATCGATATTCTTGATGATGCCTACAGATGGAGGAAATATGGACAGAAAGTAGTTAAAGGAAATCCAAATGCAAGGAGTTATTACAAATGCACAGCCCCTGGTTGTTCAGTGAGGAAACATGTTGAGCGAGCCGCGACTAATATAAAATCACAATGCACCGGCGCACCAATAAGGCCTGCGGCCGTGAATGGTTATTCTAGCGCGCCGAATTTCACGAATTCACTTTACAATCCTAGGCTTCCGGCCACCGGAACTCAAGAATCATCTTCCCTAGACATGCTGCAAGGCTCTGGACTTTTCGGCTACACGTCTCTTGGAAGATCAATGGGTTCATATGGAAACAATACGCAACTTTCGGATGGTGTATACATCAAGGCCAAGGATGAAAGGAAGGATGACTCATTCCTCGAGTCATTTCTTTCAAAGAACTAA | 699 | 0.4149 | MDTEEEKLDANSDSTNNSTTKFQNVSTILDPDFQFHIQIKPHQRYLLQGTNSTDLKHKQQKGENEHDGHSAYGSRTVREPRVVVQTTSEIDILDDAYRWRKYGQKVVKGNPNARSYYKCTAPGCSVRKHVERAATNIKSQCTGAPIRPAAVNGYSSAPNFTNSLYNPRLPATGTQESSSLDMLQGSGLFGYTSLGRSMGSYGNNTQLSDGVYIKAKDERKDDSFLESFLSKN | 232 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu01g02438 | 232 | ProSiteProfiles | WRKY domain profile. | 88 | 139 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Adu01g02438 | 232 | SMART | WRKY_cls | 93 | 143 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Adu01g02438 | 232 | MobiDBLite | consensus disorder prediction | 53 | 74 | - | - | |
Adu01g02438 | 232 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 53 | 142 | IPR044810 | GO:0003700 | |
Adu01g02438 | 232 | MobiDBLite | consensus disorder prediction | 56 | 74 | - | - | |
Adu01g02438 | 232 | PANTHER | OS04G0471700 PROTEIN | 53 | 142 | - | - | |
Adu01g02438 | 232 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Adu01g02438 | 232 | Pfam | WRKY DNA -binding domain | 94 | 135 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Adu01g02438 | 232 | SUPERFAMILY | WRKY DNA-binding domain | 85 | 136 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Adu01g02438 | 232 | Gene3D | WRKY domain | 80 | 142 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu01g02438 | Adu-Chr1 | 92119004 | 92121464 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu01g02438 | 58 | 229 | WRKY Transcription Factor Family | AT2G38470 | 42.233 | 1.17e-38 | 138 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Adu01g02438 | WRKY | 6.3e-18 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu01g02438 | K13424 | - | adu:107472292 | 325.865 |