Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02438 ATGGATACAGAAGAAGAAAAACTCGATGCAAACTCAGATTCAACAAACAATTCCACAACAAAATTCCAGAATGTATCAACAATTTTAGATCCAGATTTTCAATTCCACATCCAGATAAAACCGCATCAGAGATATCTTCTTCAAGGAACAAATTCAACTGATTTGAAACACAAGCAACAAAAGGGGGAGAATGAACATGATGGTCATTCAGCCTATGGAAGTAGAACTGTTAGGGAACCTAGAGTTGTAGTTCAAACTACAAGCGAAATCGATATTCTTGATGATGCCTACAGATGGAGGAAATATGGACAGAAAGTAGTTAAAGGAAATCCAAATGCAAGGAGTTATTACAAATGCACAGCCCCTGGTTGTTCAGTGAGGAAACATGTTGAGCGAGCCGCGACTAATATAAAATCACAATGCACCGGCGCACCAATAAGGCCTGCGGCCGTGAATGGTTATTCTAGCGCGCCGAATTTCACGAATTCACTTTACAATCCTAGGCTTCCGGCCACCGGAACTCAAGAATCATCTTCCCTAGACATGCTGCAAGGCTCTGGACTTTTCGGCTACACGTCTCTTGGAAGATCAATGGGTTCATATGGAAACAATACGCAACTTTCGGATGGTGTATACATCAAGGCCAAGGATGAAAGGAAGGATGACTCATTCCTCGAGTCATTTCTTTCAAAGAACTAA 699 0.4149 MDTEEEKLDANSDSTNNSTTKFQNVSTILDPDFQFHIQIKPHQRYLLQGTNSTDLKHKQQKGENEHDGHSAYGSRTVREPRVVVQTTSEIDILDDAYRWRKYGQKVVKGNPNARSYYKCTAPGCSVRKHVERAATNIKSQCTGAPIRPAAVNGYSSAPNFTNSLYNPRLPATGTQESSSLDMLQGSGLFGYTSLGRSMGSYGNNTQLSDGVYIKAKDERKDDSFLESFLSKN 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02438 232 ProSiteProfiles WRKY domain profile. 88 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu01g02438 232 SMART WRKY_cls 93 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu01g02438 232 MobiDBLite consensus disorder prediction 53 74 - -
Adu01g02438 232 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 53 142 IPR044810 GO:0003700
Adu01g02438 232 MobiDBLite consensus disorder prediction 56 74 - -
Adu01g02438 232 PANTHER OS04G0471700 PROTEIN 53 142 - -
Adu01g02438 232 MobiDBLite consensus disorder prediction 1 23 - -
Adu01g02438 232 Pfam WRKY DNA -binding domain 94 135 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu01g02438 232 SUPERFAMILY WRKY DNA-binding domain 85 136 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu01g02438 232 Gene3D WRKY domain 80 142 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02438 Adu-Chr1 92119004 92121464 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02438 58 229 WRKY Transcription Factor Family AT2G38470 42.233 1.17e-38 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu01g02438 WRKY 6.3e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02438 K13424 - adu:107472292 325.865