Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02434 ATGGTGCTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCGCATAGAATTGGCCAGGTGTTAGATGGCCATGAGAACACCTTAGCTGTGTCAAATAATCATCCATTGAGTAGCCCTGCAAAGCATACTACTATTGGGCATAGAGCCCTTCAAAGCAGAGAACTCTTGACCAGTTTGTCAGAAGATGTGATAACGTGGATAGGTCGGAAGTCGGAACATCAGCCTGACCGGAAACGGCCCTCTCGGTCATGA 327 0.4679 MVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAHRIGQVLDGHENTLAVSNNHPLSSPAKHTTIGHRALQSRELLTSLSEDVITWIGRKSEHQPDRKRPSRS 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02434 108 CDD SF2_C_SNF 1 44 - -
Adu01g02434 108 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 2 45 - -
Adu01g02434 108 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 57 IPR027417 -
Adu01g02434 108 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1 2 45 IPR030101 GO:0006281|GO:0031297|GO:0036310
Adu01g02434 108 Pfam Helicase conserved C-terminal domain 2 43 IPR001650 -
Adu01g02434 108 Gene3D - 1 100 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02434 Adu-Chr1 92008261 92008958 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02434 1 44 RAD5 or RAD16-like Gene Family AT3G16600 54.545 2.57e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02434 K14440 - aip:107635950 117.857