Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02433 ATGTTCCCGCTTTCTTCCTTGTCCGAAGCAGAGAAGGTTCTAGGAGAAATATCTAATTATAAAGTTCAGTTGGAGGCGGTAAAAGCCAAAATCAAATCTGCTAAATCAAAAGATGAGTCTGAATCTCTTAAATTTACTCAAAAGAAACTGATTAACAAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATCTGGATTGATGGAGGTACACCCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGAGTCTAGGTGACCTAATTCAGGCCAAAGATCGTGCATATAGAATTGGGATGTGGTGCAATTCAAACCGGATAATTTGGGGGCAGATGTTAGATGCCCATGAGAACACCTTAGCTGTGTCAAATAATCAGCCATTGAGTAGCCCTGCAAAGCATACTACTATTGGGCATAGGCCTTCAAAGCAGAGAACTCTTGACCAGTTTGTCAGAAGATGTGATAATGTGGATAGGTCGGAAGTCGGAACATCATCCTGA 660 0.4152 MFPLSSLSEAEKVLGEISNYKVQLEAVKAKIKSAKSKDESESLKFTQKKLINKAGCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTPAASRQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWSLGDLIQAKDRAYRIGMWCNSNRIIWGQMLDAHENTLAVSNNQPLSSPAKHTTIGHRPSKQRTLDQFVRRCDNVDRSEVGTSS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02433 219 Gene3D - 4 159 IPR027417 -
Adu01g02433 219 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 46 201 IPR001650 -
Adu01g02433 219 SMART helicmild6 69 152 IPR001650 -
Adu01g02433 219 Pfam Helicase conserved C-terminal domain 52 152 IPR001650 -
Adu01g02433 219 CDD SF2_C_SNF 53 152 - -
Adu01g02433 219 Coils Coil 10 37 - -
Adu01g02433 219 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 12 203 - -
Adu01g02433 219 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 152 IPR027417 -
Adu01g02433 219 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1 12 203 IPR030101 GO:0006281|GO:0031297|GO:0036310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02433 Adu-Chr1 91986585 91989411 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02433 28 154 RAD5 or RAD16-like Gene Family AT1G05120 28.906 1.14e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02433 K14440 - adu:107462038 285.419