Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02425 ATGTCGAGCTGCAGCATGGATGCTGGACCTGAGCAACTGTGCTACATACCCTGCAACTTTTGCAACATTGTTCTTGCGGTGAGCGTTCCATGCACCAGCTTGTTCGACATGGTAACGGTTCGATGCGGTCACTGCACCAATCTCTGGTCCGTAAACATGGCTGCGGCCTTTCAATCACTCTCATGGCAAGATCTTCAGGGCCCTGGGCAGTGCAATCAGGAGTATAGGATTGACACAAATATTAATATGAATAATGGTGGCTCCTCTTCCAAATGCAACAATAGTAGTAGGCTTGCATCAATGCGTGCACCTACCAATCATGTTACTCAGGAAAGGGCTGTCAACCGCCCACCCGAGAAGAGGCAGCGCGTACCTTCTGCTTATAATCAGTTCATAAAGGAAGAGATCCAGAGGATTAAGGCTAATAATCCTGATATCAGTCACAGAGAAGCATTCAGTACTGCAGCAAAGAACTGGGCACATTTTCCTCATATTCATTTTGGGCTAATGTTGGAGGAGAAGCATTTGATGTCAAGGGCTGCACCTGCACTGTTGAATAAATGA 564 0.4681 MSSCSMDAGPEQLCYIPCNFCNIVLAVSVPCTSLFDMVTVRCGHCTNLWSVNMAAAFQSLSWQDLQGPGQCNQEYRIDTNINMNNGGSSSKCNNSSRLASMRAPTNHVTQERAVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLEEKHLMSRAAPALLNK 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02425 187 Pfam YABBY protein 10 169 IPR006780 GO:0007275
Adu01g02425 187 PANTHER PROTEIN YABBY 6-RELATED 1 175 IPR006780 GO:0007275
Adu01g02425 187 SUPERFAMILY HMG-box 114 163 IPR036910 -
Adu01g02425 187 MobiDBLite consensus disorder prediction 101 121 - -
Adu01g02425 187 Gene3D High mobility group box domain 106 178 IPR036910 -
Adu01g02425 187 PANTHER AXIAL REGULATOR YABBY 5 1 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02425 Adu-Chr1 91869494 91871996 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02425 11 172 C2C2-YABBY Transcription Factor Family AT2G26580 72.222 1.10e-80 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Adu01g02425 YABBY 3.5e-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02425 K25796 - gmx:100499942 314.694