Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02420 ATGGCTACTAACATTGGAATTCTACTGCTACTAATTGTGGCATCATCACTAGCACAAGCTGCACAGCATGTAGTTCCATGGATGATTCCTACTACTCAAGGCTCCTCCTTCTACTCCAATTTGCTTGCTAAAACTACATTCAATCTAAACGACATTCTTGTCTTCAACTACACAACTGGGACACATAATGTTGTCACGCTTTCAAAGGATGATTTCAAAGATTGCAGTGTCAAGAACAAGATGGAAACATTTGAGGTTGGACCTACAATGATCAAGCTCAATCGAACCGGAGAATACTATTTCGCCTGCGCCTTCCCGGCTCATTGCTCTCTTGGCCAGAAGCTTAGTGTCAATGTCATGGCCTCTTCTTCTTCCCCGGAGGCTGCACCAGCCGTGGCTCCTTCGTCCCCGGCGTCACGCCTCTCTGTTGCTGCTACTTTCTCTGTTCTTCTCATGCTCATTGCCATAAGCATCTTGTTCTAG 483 0.4596 MATNIGILLLLIVASSLAQAAQHVVPWMIPTTQGSSFYSNLLAKTTFNLNDILVFNYTTGTHNVVTLSKDDFKDCSVKNKMETFEVGPTMIKLNRTGEYYFACAFPAHCSLGQKLSVNVMASSSSPEAAPAVAPSSPASRLSVAATFSVLLMLIAISILF 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02420 160 PANTHER BLUE COPPER PROTEIN 5 148 IPR039391 GO:0009055
Adu01g02420 160 SUPERFAMILY Cupredoxins 32 119 IPR008972 -
Adu01g02420 160 ProSiteProfiles Phytocyanin domain profile. 21 121 IPR003245 GO:0009055
Adu01g02420 160 ProSitePatterns Type-1 copper (blue) proteins signature. 97 113 IPR028871 -
Adu01g02420 160 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 5 148 - -
Adu01g02420 160 Gene3D - 23 132 IPR008972 -
Adu01g02420 160 Pfam Plastocyanin-like domain 32 113 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02420 Adu-Chr1 91782835 91783419 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02420 7 160 Phytocyanin Superfamily AT2G25060 27.439 9.98e-21 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02420 - - pvu:PHAVU_003G166500g 135.191