Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02409 ATGGAGAACAAGTGCGGTTGCTGGTCTGTTCTCAAACGCGGTGTTAGAGGTTCCTGCAAATCTTCTTCAGCTTCCAGACACTCCCCTAACACTATCCCTCGTACTAGTCTCGTTTATGATGCAGCAACTGAGACAAGATACCTGAATGCTAGCAATCGAGAATTATGCCCTCCTAATGAAGCTAGAGTATCTTCTGACAATCCTGATCCCCCACCTCAGGAGAATAAGGCTCCTTGTCCACTTCTTAAATTTACATTTCAAGAACTTAAAGCTGCAACCGGAAATTTCAGACCGGATAGTATTCTTGGGGAGGGTGGTTTTGGTTATGTTTTCAAAGGATGGATAGAGGAAGATGGAACCGCCCCGGCGAAACCTGGGTCAGGGGTTACCGTGGCTGTCAAAAACTTGAAGCCAGATGGTCTTCAGGGCCATAGAGAATGGGTGGCCGAGGTTACCTTTCTCGGACAGCTTCATCATCCTAACCTTGTGAAACTTATTGGCTACTGCATTGAAGATGATCAGAGGCTTCTTGTATATGAGTTTATGACCCGGGGAAGTCTGGAGAATCATCTATTCAGAAGAACCGTACCTCTTCCGTGGTCCAACAGGGTTAAGATTGCACTTGGTGCAGCAAAAGGATTGGCCTTCCTCCATAATGGTCCTGAACCAGTCATTTATAGAGATTTTAAAACATCAAATATTTTGCTTGATACGGAATATAATGCAAAGCTTTCAGATTTTGGTCTAGCAAAAGCTGGGCCTCAAGGAGACAAGACGCATGTTTCTACCCGAGTTGTCGGAACATATGGCTATGCTGCTCCAGAATATGTCATGACAGGGCATTTGACAGCTAAAAGTGATGTTTATAGCTTCGGAGTTGTATTACTTGAGATTTTAACAGGAAGAAGATCGATGGACAAGAAGCGCCCGAGCGGGGAACAGAATCTTGTTTCATGGGCTAGGCCATATTTAGCTGACAAGAGAAAGCTATATCAACTTGTGGATCCTCGGCTGGAATTAAATTATTCTCTAAAAGGGGTGCAGAAAATCTCTCAGTTAGCTTACAGTTGCCTCAGTAGAGACCCGAAATGCCGTCCCAACATGGACGAAGTGGTGAAAGCTCTGATGCCGCTGCAAGATCTCAATGACCTTGCAATCTTGTCATATCACTCTCGAATATCCCAGCAAGGGCGGCGAAAAAAGAAATCGGATGGAACTCCACATCTCAGCTACACACAATCTAAGAGCATCATCAGGGCTTCTCCCTTGAATACTGGCAAGCAGCGTCGATGA 1293 0.4517 MENKCGCWSVLKRGVRGSCKSSSASRHSPNTIPRTSLVYDAATETRYLNASNRELCPPNEARVSSDNPDPPPQENKAPCPLLKFTFQELKAATGNFRPDSILGEGGFGYVFKGWIEEDGTAPAKPGSGVTVAVKNLKPDGLQGHREWVAEVTFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTVPLPWSNRVKIALGAAKGLAFLHNGPEPVIYRDFKTSNILLDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYLADKRKLYQLVDPRLELNYSLKGVQKISQLAYSCLSRDPKCRPNMDEVVKALMPLQDLNDLAILSYHSRISQQGRRKKKSDGTPHLSYTQSKSIIRASPLNTGKQRR 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02409 430 SUPERFAMILY Protein kinase-like (PK-like) 78 379 IPR011009 -
Adu01g02409 430 Pfam Protein tyrosine and serine/threonine kinase 100 375 IPR001245 GO:0004672|GO:0006468
Adu01g02409 430 MobiDBLite consensus disorder prediction 56 77 - -
Adu01g02409 430 Gene3D Transferase(Phosphotransferase) domain 1 182 394 - -
Adu01g02409 430 Gene3D Phosphorylase Kinase; domain 1 65 181 - -
Adu01g02409 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Adu01g02409 430 PANTHER OS01G0588500 PROTEIN 74 398 - -
Adu01g02409 430 CDD STKc_IRAK 102 378 - -
Adu01g02409 430 MobiDBLite consensus disorder prediction 407 430 - -
Adu01g02409 430 MobiDBLite consensus disorder prediction 395 430 - -
Adu01g02409 430 ProSiteProfiles Protein kinase domain profile. 96 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g02409 430 ProSitePatterns Protein kinases ATP-binding region signature. 102 134 IPR017441 GO:0005524
Adu01g02409 430 PANTHER OS01G0588500 PROTEIN-RELATED 74 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02409 Adu-Chr1 91633810 91636818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02409 84 375 Glycoside Hydrolase AT3G07070 55.743 2.74e-111 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Adu01g02409 PK_Tyr_Ser-Thr 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02409 - - gmx:100785385 817.379