Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02387 ATGCCGTTGGCGTTGAGGAAAGACACGCTTAATGGTGACCCTGAGTCTCTTCACCAACCTTTGCTTTCTTCCCAAAGATCCATAGTCAACTCTACTTCTCAGGTTGCCATCGTAGGCTCCAATGTCTCCCCAATTGAGAGCCTTGACTACGAGATCATAGAGAACGAGTTCTTCAAGCAGGATTGGAGGAGCAGAGGGGCCTCTCAGATATTCCAATACATATTCATGAAGTGGCTCTTGTGCTTCCTCATTGGTTTCATCGTTAGCCTCATCGCATTCTGCAACAATCTCGCTGTTGAGAATCTCGCTGGCATCAAGTTTGTTATCACATCCAATATGATGTTGGAAAGGAGGTTTCTGTTGGCATTTGCAGTATTTTTCGCTTCGAATTTGGGTCTCACTATCTTTTCTGCTGTAATCACGGCTTTGATAGCACCGGCAGCTACTGGTTCCGGTATACCGGAGGTGAAGGCTTACCTAAATGGGGTGGATGCACCTGGAATTTTTACTGTACGGACTCTGTTTGTTAAGATTATTGGAAGCATTACAGCAGTGTCATCATCTCTTCTTATTGGGAAAGCAGGGCCCATGGTCCATACAGGTGCATGTGTGGCATCATTGTTGGGGCAGGGCGGGTCGAAGAGATATGGTTTAACGTGGAAGTGGTTACGCTTTTTTAAGAATGACCGAGATCGACGAGATTTGGTAATGTGTGGATCAGCTGCTGGAATTGCGGCTGCCTTTCGTGCCCCAGTTGGTGGGGTGTTGTTTGCTCTTGAAGAGATGACATCTTGGTGGAGAAGTGCACTTCTCTGGAGAGCTTTCTTCACAACAGCAATAGTTGCAATTGTGCTTCGTGCTATGATTGATGTATGTTTAAGTGGTAAATGTGGGTTATTTGGTAAAGGGGGACTGATAATGTTTGATGTTTATTCAGCAAGTATTTCATATCATTTGGCGGAAGTTCCTCTTGTGTTTATTCTTGGCGTTATAGGAGGGATTCTCGGAAGCTTATATAACTTTATGCTGAGCAAAGTTCTTCGTGTATACAATTTTATCAATGAGAAAGGCACCATATGCAAAATTGTGCTTGCCTGTGTAATCTCCATTTTTACCTCCTTTCTTCTTTTTGGATTGCCATGGTTTGCATCTTGCCAACCTTGTCCTCTTGATGCAGCAGAGCCTTGCCCAACAATAGGCCGATCCGGCAACTTCAAGAAATTCCAATGTCCACCCGATCACTACAATGATCTTGCCAGCCTCATTTTTAACACAAACGATGATGCTATTAGGAATCTATTTAGCAGGGACACTAATGAAGAGTTTCAGTATTCATCAATGTTCATCTTTTTCATCACATGCTTTTTCTTAAGTATCTTTAGCTATGGAGTTGTTGCTCCAGCTGGTCTCTTTGTGCCGGTTATTGTTACTGGTGCATCTTATGGTCGCTTTGTTGGCATGTTGGTAGGTAAAAGGACCAATCTTCACCATGGCCTTTATGCTGTTCTTGGTGCTGCTTCTTTTCTCGGTGGATCGATGAGGACAACAGTTTCGCTATGTGTAATTATGCTGGAATTGACGAATAATTTGTTATTGCTACCATTGATCATGATGGTGCTTTTGGTATCCAAGACTGTAGCTGATGCTTTCAATGCAAATATATATGACCTAATTATGAAAGCCAAAGGTTTCCCTTATTTAGAAACTCATGCTGAACCATATATGAGGCAGCTAACGGTAGGTGATGTCGTCACGGGGCCACTTCAGATGTTTAACGGCATTGAGAAAGTCCGCAATATAATGTTCATTCTCAAAACTACAAGGCATAACGGGTTTCCTGTTATCGACGAGCCTCCACTTTCTGAAGCACCAGTTTTATCAGGTTTAATCCTCCGTGACCATCTTGTTACTTTGTTAAAGAATAAAGTTTTTTTTCCCACACCAAGGGCGATAGGGGATGATGTCTTCAAGAAGTTTACATCAGATGATTTTGCAAAGAAGGGTTCAAACAAAGGTGAAAAGATTGAAGATATACAACTAACAGAGGAAGAAATGGAAATGTTCATAGATTTACATCCATTTACAAATACATCACCATATACTGTTGTGGAGACAATGTCACTGGGAAAGGCCCTTACACTTTTTCGAGAAGTAGGTTTAAGGCACCTGCTAGTGATACCCAAGATCACTGGTAGATCACCTGTAGTGGGTATACTAACGCGACACGACTTCATGCCGGAACATATATTGGGGGTGCATCCTTTGCTGGTAAGTAGCAGGTGGAAAAGACTAAGGTTCCGGTTCCGTTGTCTGGGAAATCTCTTCTCTGGCTTCTGA 2337 0.427 MPLALRKDTLNGDPESLHQPLLSSQRSIVNSTSQVAIVGSNVSPIESLDYEIIENEFFKQDWRSRGASQIFQYIFMKWLLCFLIGFIVSLIAFCNNLAVENLAGIKFVITSNMMLERRFLLAFAVFFASNLGLTIFSAVITALIAPAATGSGIPEVKAYLNGVDAPGIFTVRTLFVKIIGSITAVSSSLLIGKAGPMVHTGACVASLLGQGGSKRYGLTWKWLRFFKNDRDRRDLVMCGSAAGIAAAFRAPVGGVLFALEEMTSWWRSALLWRAFFTTAIVAIVLRAMIDVCLSGKCGLFGKGGLIMFDVYSASISYHLAEVPLVFILGVIGGILGSLYNFMLSKVLRVYNFINEKGTICKIVLACVISIFTSFLLFGLPWFASCQPCPLDAAEPCPTIGRSGNFKKFQCPPDHYNDLASLIFNTNDDAIRNLFSRDTNEEFQYSSMFIFFITCFFLSIFSYGVVAPAGLFVPVIVTGASYGRFVGMLVGKRTNLHHGLYAVLGAASFLGGSMRTTVSLCVIMLELTNNLLLLPLIMMVLLVSKTVADAFNANIYDLIMKAKGFPYLETHAEPYMRQLTVGDVVTGPLQMFNGIEKVRNIMFILKTTRHNGFPVIDEPPLSEAPVLSGLILRDHLVTLLKNKVFFPTPRAIGDDVFKKFTSDDFAKKGSNKGEKIEDIQLTEEEMEMFIDLHPFTNTSPYTVVETMSLGKALTLFREVGLRHLLVIPKITGRSPVVGILTRHDFMPEHILGVHPLLVSSRWKRLRFRFRCLGNLFSGF 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02387 778 PRINTS Chloride channel signature 146 163 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Adu01g02387 778 PRINTS Chloride channel signature 177 196 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Adu01g02387 778 PRINTS Chloride channel signature 241 260 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Adu01g02387 778 PRINTS Chloride channel signature 466 486 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Adu01g02387 778 PRINTS Chloride channel signature 498 514 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Adu01g02387 778 PRINTS Chloride channel signature 516 535 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Adu01g02387 778 PRINTS Chloride channel signature 554 568 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Adu01g02387 778 SUPERFAMILY Clc chloride channel 55 569 IPR014743 -
Adu01g02387 778 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 15 769 - -
Adu01g02387 778 Gene3D Clc chloride channel 69 567 - -
Adu01g02387 778 SUPERFAMILY CBS-domain pair 570 745 IPR046342 -
Adu01g02387 778 SMART cbs_1 698 749 IPR000644 -
Adu01g02387 778 SMART cbs_1 587 640 IPR000644 -
Adu01g02387 778 CDD CBS_pair_voltage-gated_CLC_euk_bac 570 747 - -
Adu01g02387 778 PANTHER CHLORIDE CHANNEL PROTEIN 15 769 - -
Adu01g02387 778 Gene3D - 568 746 IPR046342 -
Adu01g02387 778 PRINTS Plant CLC chloride channel signature 51 59 IPR002251 GO:0005247|GO:0006821|GO:0016020
Adu01g02387 778 PRINTS Plant CLC chloride channel signature 262 270 IPR002251 GO:0005247|GO:0006821|GO:0016020
Adu01g02387 778 PRINTS Plant CLC chloride channel signature 276 286 IPR002251 GO:0005247|GO:0006821|GO:0016020
Adu01g02387 778 PRINTS Plant CLC chloride channel signature 294 301 IPR002251 GO:0005247|GO:0006821|GO:0016020
Adu01g02387 778 PRINTS Plant CLC chloride channel signature 418 434 IPR002251 GO:0005247|GO:0006821|GO:0016020
Adu01g02387 778 Pfam CBS domain 696 744 IPR000644 -
Adu01g02387 778 Pfam Voltage gated chloride channel 135 548 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Adu01g02387 778 ProSiteProfiles CBS domain profile. 695 755 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02387 Adu-Chr1 91336081 91340343 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02387 15 767 Ion Channels AT5G33280 76.096 0.0 1164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02387 K05016 - gmx:100817901 1241.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02387 01 91336081 91340343 Adu01g02387 01 91336081 91340343 ECH