Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02355 ATGCATGATAGAATCGCGTGCACTCTGGCTTTTGCGTTTGGGGTGTATACCCTAATTCTCTCAACACCACTGCCACTTCACTCTCTCCTCTCACTCAAACCCCAAAGGTGTTGCGTGGTCTTGTGGAGAATGGGAAGTACTGGTACTGACAAGATGCCAGGCAATAACAGCACAGGAAGTTCAGAAACCACTATTGAGATAAAGATCAAGACCTTGGATTCACAGACTTACACCCTCAGAGTGGATAAACAGATGCCAGTCCCTGCTCTGAAAGAACGGATTGCTTCTGTCACTGGAGTGTTATCACATCGGCAGCGCTTAATTTGCCAAGGAAAGGTTCTGAAGGACGATCAACTCCTGTCTGCTTACCATGTTGAAGATGGTCATACCTTGCATCTGGTTTCTAGGCAACCTGATCTACCAGGATTTTTGCCCGGTCATTCAGGGGCTGACCCAAATTCAAGCACAAGTCATGGCCACAGTAGTCAAATATCCCCGGGTGTAGAGCATGACTCCCAAGGCTTTGGAAGAACTTCAGGTTCCAGTGGTCTTTCAGATTCATCCCATCCTCAGCCTGAACAAACTGGTTTGCGGTATTCATCAGATAGGTCGCGTAATACCTTTGTACATCCAGCAGCAGCTTCTTTGGGATCTTTGCAGCCTCCTGTTATTCCCGATTCTTTGACAACACTATCCCAATTTCTGAGTCATATAAGTCACGAATTTGATGCAATTGTCAGAGAAGGGGGCAATAATGTCCAAGCAGCTGAGGCTCATAGGAATGAAGAAATGGGGTCTGCTTCGTCACGATTGGGTTCAACAGCAGAAGCACTTACATCACCTGCATCCTTGGCAGAAGTCATGCTATCTACCAGACGAATGATGATTGAACAAGCTGGGGAATGCCTACTTCAACTTGCAAGACACCTGGAGAATCAGGCAAATGTAACTGATCATTTGATGCGGTCAAGCATTCAGTCTAGGGCTTTGAGGACTGGAGTTCTGTTCTATAACCTGGGTGCATTATTCCTTGAGCTTGGCCGCACAACCATGACATTGCGCTTGGGTCAAAGTCCGTCTGAAGCTGTAGTTAATGGTGGGCCTGCAGTTTTCATATCTCCGTCTGGTCCTAACCATATCATGGTTCAGCCTCTTCCTTTTCAACCTGGAGCGAACTTTGGTACTGTCCCCATAGGAACTGCTCAGTCTAACGCAAGTTTAGGTAGTGGACTTGGTTCAAGTTTTTTCCCAAGGCGGATTGATATACAGATACGACGAGGGGTCTCAACAGCCACACCAAATGCCAGTCAAGAAGAACGTGCTGATACACAGTCTGCTTCAGTACAAAGAAATCAAGGTGAAGGTCCTGCTAATCAGGCAGCCTCAAGGCGTTCAGATGTGGCTGGTGCTGGGGAGCAAGGAGTAAGGATTGTGCCAATTAGAACCATGGTTGCAACAGTACCAGGTTCCTTAGGTCGTCCACCTGCAGAACCATCTGGTAATTCTATAGGGGTTTACTATCCGGTTCTCGGGAGATTTCAACAGGTATCTTCAGGGCATGGAAATAGTGAACAAGGATCTCAACCAGCTAGTCAGCATCATGCTGTGCAACAGTCCAGTCATGAAAACACATTGCAAAGGCAAAACGAAGATTCTGCAAGGAATGGATCCTCATCAACTCCTACCACAAGCTCGAATTCCCGTGTGGTGAATATCAATATCCTGGCAGCTGGTGGGGCCCAGAATAATCAGGAGTCTGAGCGACAGATACCAAACAGTGTTCTTCAGTTTATAAGGACCCTGTTTCCTGGGGGAGAAATTCATGTTGAAGACTTGAATTTACAGGGAACAAATTCAGGTTCTACCCCAGAGCAAGCTGCAACAGCAAGGGCAGCTCAGGCCCCTGAAGCTGAACCTAGAGTTAGTGATGAAGGAAGGTTTTTGTCAAACATACTCCGCGAAATCATTCCCCTCGTGTCTCAACAAACAGGCTCTGGAAGAAATCCTTCAGAGGAACAAGCAGCTCAGGATTCTTCATCACAGGTGGAAACTGATGCAGGGACATCACGAAGGCGGAATGGTTCAGATCCAAGCCCCCCTGATTCTAAACGCCAAAAGATGGAGTGA 2127 0.4716 MHDRIACTLAFAFGVYTLILSTPLPLHSLLSLKPQRCCVVLWRMGSTGTDKMPGNNSTGSSETTIEIKIKTLDSQTYTLRVDKQMPVPALKERIASVTGVLSHRQRLICQGKVLKDDQLLSAYHVEDGHTLHLVSRQPDLPGFLPGHSGADPNSSTSHGHSSQISPGVEHDSQGFGRTSGSSGLSDSSHPQPEQTGLRYSSDRSRNTFVHPAAASLGSLQPPVIPDSLTTLSQFLSHISHEFDAIVREGGNNVQAAEAHRNEEMGSASSRLGSTAEALTSPASLAEVMLSTRRMMIEQAGECLLQLARHLENQANVTDHLMRSSIQSRALRTGVLFYNLGALFLELGRTTMTLRLGQSPSEAVVNGGPAVFISPSGPNHIMVQPLPFQPGANFGTVPIGTAQSNASLGSGLGSSFFPRRIDIQIRRGVSTATPNASQEERADTQSASVQRNQGEGPANQAASRRSDVAGAGEQGVRIVPIRTMVATVPGSLGRPPAEPSGNSIGVYYPVLGRFQQVSSGHGNSEQGSQPASQHHAVQQSSHENTLQRQNEDSARNGSSSTPTTSSNSRVVNINILAAGGAQNNQESERQIPNSVLQFIRTLFPGGEIHVEDLNLQGTNSGSTPEQAATARAAQAPEAEPRVSDEGRFLSNILREIIPLVSQQTGSGRNPSEEQAAQDSSSQVETDAGTSRRRNGSDPSPPDSKRQKME 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02355 708 PANTHER SCYTHE PROTEIN UBIQUITIN-LIKE DOMAIN PROTEIN 169 708 - -
Adu01g02355 708 MobiDBLite consensus disorder prediction 428 473 - -
Adu01g02355 708 MobiDBLite consensus disorder prediction 136 204 - -
Adu01g02355 708 Gene3D - 58 142 - -
Adu01g02355 708 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 169 708 - -
Adu01g02355 708 PANTHER SCYTHE PROTEIN UBIQUITIN-LIKE DOMAIN PROTEIN 44 168 - -
Adu01g02355 708 PRINTS Ubiquitin signature 75 95 IPR019956 -
Adu01g02355 708 PRINTS Ubiquitin signature 117 138 IPR019956 -
Adu01g02355 708 PRINTS Ubiquitin signature 96 116 IPR019956 -
Adu01g02355 708 MobiDBLite consensus disorder prediction 428 459 - -
Adu01g02355 708 MobiDBLite consensus disorder prediction 659 708 - -
Adu01g02355 708 SUPERFAMILY Ubiquitin-like 60 138 IPR029071 -
Adu01g02355 708 ProSiteProfiles Ubiquitin domain profile. 65 140 IPR000626 GO:0005515
Adu01g02355 708 MobiDBLite consensus disorder prediction 516 569 - -
Adu01g02355 708 MobiDBLite consensus disorder prediction 149 204 - -
Adu01g02355 708 SMART ubq_7 65 136 IPR000626 GO:0005515
Adu01g02355 708 MobiDBLite consensus disorder prediction 659 695 - -
Adu01g02355 708 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 44 168 - -
Adu01g02355 708 Pfam Ubiquitin family 67 137 IPR000626 GO:0005515
Adu01g02355 708 CDD Ubl_ubiquitin_like 67 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02355 Adu-Chr1 91024216 91031094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02355 65 136 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 37.500 4.63e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02355 K23390 - gmx:100783070 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02355 01 91024216 91031094 Adu01g02355 01 91024216 91031094 ECH