Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02353 ATGTGTGTTGAGGAAGCTGAGCAAGTTGAGCATCATGATCATCAAGATATGGAGAATACTAAGAAGGAAGACATGATTCATAACAAAAAGTGGCCTTTGCATTGTGATAATCATAATCTCTTGATGGACACCACCTCTTCTTTTGCATCTTCCACTGCAAACTCACTCCCTCTGGAAAGCATATGTGAGGAGACAGTGATTGCAGACAAGAAACAGAACGGTTCAAGCTTTGTCCCGGCTCTGCGCTCCGGCGAATGGTCTGATATCGGAGGCCGGCCTTACATGGAAGATACACACATATGCATTGGAGACATGGCAAAAAGATTTGGATATAATAACAACCTACTTTCTGAGGAAGCTGTTTCATTTTATGGTGTATTTGATGGACATGGAGGGAAGAGCGCGGCTCAATTCGTGCGCGATCATCTGCCTAGGATCATTGTTGAGGATGCAGGCTTTCCTTTGGAACTTGAGAAGGTTGTTACAAAGTCTTTTTTGGACACTGATGCAGAGCTTAAAACATACTCTCTTGAATCTTGCCTCTCTTCTGGAACCACTGCACTCACTGCAATTATATTCGGAAGGTCATTGCTTGTAGCCAATGCAGGGGACTGCAGGGCTGTGTTGTCGCGCCATGGCGCGGCAATAGAAATGTCCAAGGATCACAGGCCTTACTGCATCAAAGAGAGAAATCGAATCGAGTCCCTAGGTGGATTCATTGATGATGGCTACCTGAATGGTCAGTTAGGTGTTACTCGTGCTCTAGGCGACTGGCATCTTGAAGGAATGAAGGACACTGGTGGAGGTGGTGGACCATTGAGTGCTGAGCCTGAACTCAAATTGATGACATTGACCAAAGAAGATGAATTCTTGATAATAGCAAGTGATGGAATTTGGGATGTTTTCCGGAGCCAAAATGCTGTGGATTATGCTCGGAGGAGGCTTCAAGAACACAATGATGTGAAGCAATGTTGCAAGCAAATAGTAGAGGAAGCAATAAAGAGAGGAGCAACAGATAACTTAACGGTTGTGATGGTGTGTTTTCACTCAGATCCACCACCCCCTGTGGTTGTGGAAAGAGCAAGAGTTAGAAGAAGCATATCTGCTGAGGGACTGCATAACCTCAAATGCCTGCTACAAGATATTAAAAGCAGAAATGAATTTGTAAATAATTGTTTGATGCTATCTATAAGAGAAATGATTTGGAGCACTTCTTTTTGTATGGATCAACACATGAATTCTCTAGCAAGCTACATAAGCATCAATAGCCTCTTCTTTTTTCCATGTATCCTTCACCCTTCGCTTAATGGTTGCTCTTGGCACATCTTTGAAGTGTAG 1338 0.4342 MCVEEAEQVEHHDHQDMENTKKEDMIHNKKWPLHCDNHNLLMDTTSSFASSTANSLPLESICEETVIADKKQNGSSFVPALRSGEWSDIGGRPYMEDTHICIGDMAKRFGYNNNLLSEEAVSFYGVFDGHGGKSAAQFVRDHLPRIIVEDAGFPLELEKVVTKSFLDTDAELKTYSLESCLSSGTTALTAIIFGRSLLVANAGDCRAVLSRHGAAIEMSKDHRPYCIKERNRIESLGGFIDDGYLNGQLGVTRALGDWHLEGMKDTGGGGGPLSAEPELKLMTLTKEDEFLIIASDGIWDVFRSQNAVDYARRRLQEHNDVKQCCKQIVEEAIKRGATDNLTVVMVCFHSDPPPPVVVERARVRRSISAEGLHNLKCLLQDIKSRNEFVNNCLMLSIREMIWSTSFCMDQHMNSLASYISINSLFFFPCILHPSLNGCSWHIFEV 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02353 445 ProSiteProfiles PPM-type phosphatase domain profile. 82 348 IPR001932 -
Adu01g02353 445 Pfam Protein phosphatase 2C 94 340 IPR001932 -
Adu01g02353 445 CDD PP2Cc 82 348 IPR001932 -
Adu01g02353 445 Gene3D - 62 351 IPR036457 -
Adu01g02353 445 MobiDBLite consensus disorder prediction 1 22 - -
Adu01g02353 445 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Adu01g02353 445 PANTHER PROTEIN PHOSPHATASE 2C 1 370 IPR015655 GO:0004722|GO:0006470
Adu01g02353 445 SMART PP2C_4 72 346 IPR001932 -
Adu01g02353 445 SUPERFAMILY PP2C-like 74 349 IPR036457 -
Adu01g02353 445 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02353 Adu-Chr1 91010154 91012226 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02353 42 382 PP2C-type Phosphatase Gene Family AT2G25620 56.497 6.07e-130 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Adu01g02353 PP2C 6.3e-69 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02353 K14803 - gmx:100782648 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02353 01 91010154 91012226 Adu01g02353 01 91010154 91012226 ECH