Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02346 ATGATAAGAATTGAAGGAGAGAATTGCCCTAGTGCGGTTGTGGAATGGTACCAATGTTCTGCGTCAAAGGATCAAAGACACTATTTTGACCTGAGCTTGAAGGCGAAGAAACACCTCGTTTCGTTGGGTTGGACCTTTTCTTATTGCGACAAGAAAACTCGCTGGGAACTTCGTTACAAATCCCCTTCTGGTAAGACCTATGTTTCTCTCAGAACTGCATGCAAAGCCTGCATTGAAGAGAAAAAGAAAGATTCTTCATCTAGTTCCAATTCATTGCAAGGATCACAGCAATCTCAATCCCAATCTCTACCTGCTGCATCACCAACGAGTTCCAAGGTAACCGGTGGTAGGCCTCGGAAACGCAAGAAACCGAGTGACGATGAAGATTGGACTCTTCCGGAGACGCAAGTATCCAATTTAGTAAGTCCTCGTTCTGGTTCTCGTGCACGTGGCGGTGGCGGTGGCCGTCGTCGTCGTGATTCTGGTGAAAGTCCTAATGCCGCAAGAAAAGTAAGGAGGGCACGGAGTTCTTCTGATAATCCAAGAACGATTCTTTCTTGGCTGATTGACAACAATGTGGTGGCGCAGGAGGCGTGGGTTTTCTGCCGTGGAGGGAAAGATAATGAATTGGTGAAGAGAGGGAAGCTGTTTCGTTCTGGTATTGTCTGCCATTGTTGTGATTCTTTATGCACACTCTCTCAATTCCAGGGTCATGCCGGTTGCAAAGGTCAACCTCCCTCTGCTAGTATCTTCTTGGAACAAGATAAAAGGTCTTTGTTGGATTGCCAGAAACAAGCATTGATGATGATCAAGGCTAACAACAATGGGGATAATGATCATCATCATGAAAATGATTCCATTTGTTCAATTTGTCTCCAGGGGGGTTTCATTCTTCTCTGTGATCGCTGTCCGGCGTCATTCCACGCCGAATGTATTGGCCTTGATCATGTTCCCCCTGGTGATTGGTTCTGCCCTTCATGCTCTTGCAGAATTTGCAACCGTCCCAAATGCATAGAAGATTCTTGTAGAGAGGAAAGTCATTTGGCTAATAATTTTATAGCTTGTTATCAGTGTCAACGCAGATTCCACATTGGATGTTTAGCTTCTAGAGGCTTTGCTTTTCTGAACATGGAAACCGATTGGTTTTGCAATGAAGATTGTCAGAAGATATTTTTGACACTGAATAACATGTTGGGAAAACCAATTCCTGTGGGTGATGGTAATCTAACTTGGACATTGTTGACGAGCCTCAAGAAAAGCACTAATGACAATGATGACGATGGAACCATTACTGAAATGGAGAGCAAGCTAAATGTCGCACTTGGAATAATTCATGAGTGTTTTGAGCCCATCATAGATCCTGTATTTGGAAGAGACATTGCTGCAGATATTATGTTCAGCAGATATTCATGGCTGCCACGTATGAACTTTACAGGGTTCTACACTGTGATTCTAGAGAGGAATGATGAGGTGATCTCTGTTGCAAACACAAGGATTTATGGCCAAAAGGTTGCAGAAGTGCCGCTTGTCGCGACGAGTGAGCAGTATCGAAAGCAGGGAATGTGTCGAATTCTGATGGATCAGCTTGAGAAGCTGTTGGATAAGTTGGGTGTTGAGAGGTTGCTATTGCCTGCTGCTCCTTATTTAGTAGAAACTTGGACAAACTCATTTGGATTTGCAAAAATGACACACTCAGATCAGTATTACTGTGTAGGTTATCCTCTTGCAAATTTTCCAGACACAACATTGTGCCACAAATCATTGAAGCAACCTTTGATGCTGTATTGA 1788 0.4362 MIRIEGENCPSAVVEWYQCSASKDQRHYFDLSLKAKKHLVSLGWTFSYCDKKTRWELRYKSPSGKTYVSLRTACKACIEEKKKDSSSSSNSLQGSQQSQSQSLPAASPTSSKVTGGRPRKRKKPSDDEDWTLPETQVSNLVSPRSGSRARGGGGGRRRRDSGESPNAARKVRRARSSSDNPRTILSWLIDNNVVAQEAWVFCRGGKDNELVKRGKLFRSGIVCHCCDSLCTLSQFQGHAGCKGQPPSASIFLEQDKRSLLDCQKQALMMIKANNNGDNDHHHENDSICSICLQGGFILLCDRCPASFHAECIGLDHVPPGDWFCPSCSCRICNRPKCIEDSCREESHLANNFIACYQCQRRFHIGCLASRGFAFLNMETDWFCNEDCQKIFLTLNNMLGKPIPVGDGNLTWTLLTSLKKSTNDNDDDGTITEMESKLNVALGIIHECFEPIIDPVFGRDIAADIMFSRYSWLPRMNFTGFYTVILERNDEVISVANTRIYGQKVAEVPLVATSEQYRKQGMCRILMDQLEKLLDKLGVERLLLPAAPYLVETWTNSFGFAKMTHSDQYYCVGYPLANFPDTTLCHKSLKQPLMLY 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02346 595 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 428 580 IPR000182 GO:0016407
Adu01g02346 595 Pfam PHD-finger 287 329 IPR019787 -
Adu01g02346 595 MobiDBLite consensus disorder prediction 84 179 - -
Adu01g02346 595 Pfam Tify domain binding domain 214 266 IPR032308 -
Adu01g02346 595 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 464 576 IPR016181 -
Adu01g02346 595 MobiDBLite consensus disorder prediction 153 177 - -
Adu01g02346 595 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 2 591 - -
Adu01g02346 595 ProSiteProfiles Zinc finger PHD-type profile. 285 330 IPR019787 -
Adu01g02346 595 MobiDBLite consensus disorder prediction 131 145 - -
Adu01g02346 595 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 330 390 IPR013083 -
Adu01g02346 595 Gene3D - 466 575 - -
Adu01g02346 595 PANTHER DUF724 DOMAIN-CONTAINING PROTEIN 4-RELATED 2 591 - -
Adu01g02346 595 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 276 329 IPR013083 -
Adu01g02346 595 SUPERFAMILY FYVE/PHD zinc finger 263 329 IPR011011 -
Adu01g02346 595 CDD NAT_SF 483 543 - -
Adu01g02346 595 SMART PHD_3 287 328 IPR001965 -
Adu01g02346 595 SMART PHD_3 329 388 IPR001965 -
Adu01g02346 595 Pfam Acetyltransferase (GNAT) domain 477 562 IPR000182 GO:0016407
Adu01g02346 595 MobiDBLite consensus disorder prediction 87 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02346 Adu-Chr1 90955555 90957342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02346 164 536 PHD Transcription Factor Family AT5G58610 43.264 3.80e-92 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Adu01g02346 Acetyltransf_1 0.0001 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02346 - - aip:107608518 1054.28