Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02343 ATGGCGTTTGATCAAAATTCCGTAACAAAAGATCTGCGTCCGCTGAATGTAGCTACGACCTTGGCTATGGCGGAGGAGCACTTTGTTTCACCGCCGACCACCGCCACAGCCACCACACCTCCCACGCCCAATTCGGGTCGTGAAATGGGAAGCCCCGGCACGCCGCAGGTACCTCTTTTCTACTCACCTACAGTCTCTGACGGCGCCACCCTCGTTGGATTGAGCTACGGGAATGTGCCCTCCACCGCTGGCACTACGTGGTGCTTACGTCCCGCCATGTCCATTGCCCATCCCAATGCGAACCCTGCCATTGGGTTTAATTATGGTCATAGTTGTTGTAATAGGGTTGCACCTGGCAATGCTACTTTGAATTTGGGGAACTGGGTGGGGACTAATGGCGCAATGGATAAGGCTTGTAATGATGCTGGTAATGGTTTTCCTGCCTACGGTGGTCTTAGGATTAACAGGGTCGTTGCCAACGCCACTGATCAGGCTACTTATGGCCATACTGCTGGCCACCGGGCTGATCATGTTGTTGAGGATGGTGGCGGTAGTGGTGGCGGCGTCGATGAATCTGTTTCTGGGAGGAAAGTGAAGTTCTTGTGCAGCTTTGGCGGGAGGATTTTGCCGAGGCCTAGTGATGGCATGTTGAGATATGTTGGAGGGAAGACTAGGATTATTAGTGTTAGGAGAGATGTGAGATTCAATGATTTGATGCAGAAGATGGTTGATACTTATGGGCAGCCTGTGGTTATAAAGTATCAGCTCCCTGAGGAGGAGCTTGATGCACTGGTCTCAGTTTCGTGCCCCGATGATGTTGAGCATATGATGGAGGAGTATGAAAAGTTGATGGAGAGGTCCCCTGACGGCTCTGCTAAATTGAGGGTTTTCCTTTTTTCTGCTGCTGATCTTGAAATCTCCGGCGGGATGCACTTTGCAGACTTGCAGGATAGCGGTCAGAGATATGTCGAGGCCGTGAATGGAATTGCAGATGAGATTAGTATTGGAATCACTAGGAAGGAGAGCGTTACAAGTGCAGCCTCAACTCAGAATTCTGATTTGAGTGGCTCGGAGACCCTTGATAGTTTAATTTCTGGTGATGTAAGTGCAGTGCCCAAGGGAAATGTAGCAGCTTCTTCTGACACTCCTTCAAATTTGATGGCTTCTGAGGCCAGTGGAGCTTCTGCAGTTTTGATGGGCATGTCGGCTGCTAGGACTCCAACCCACGCACCATATTTCCATAATGAGGTCGACCTAGAGAGGTCTATACCTGCTACAATGTCTCAGCAGTCAGTTGGGTTGCAGCAAAGTGGAATGGAAGTTCCATATTCTTCACCTTATTTACAGCCCTTTTTTGATTTGCGCCAGGAAGTTATGAATTATGCAGATTATGTCCAGATGCCTCCACAGACAGGGTTTCGAAATGCTCAGCTTCTAGGGAAGACAGGGCAAGTCTTCACTCAACCACAGTTTCATGATAACAATCCAGGTTCAGCATCTCATCAGGTCATTCCTGGCATGCAAATGACATTTACTCAACAAGGCATGCCTTCTCATGTTGGTGTGAGGTCAAATGTCGTCCAACCACAACCTGTGATGCAACTACAGCAAAATCGTTCAGAGCAGTATAATGATGAAAATACATCAGGGATGAGAATTTTCCAGCTTCCCACTGAGCAAGGTTACAACACTTACCAGGTTCCAATGAATAGAGTCCCTTCTGTCATCGTTGGAGGTAATTATGGCTGGGTTCAGGTTCCTTCACAAGATCAAGTTGTTTACTCTGATGGGTTATTACCCCAACAACAGGTAATGGTCCCTGAGAAAAGCCAAAGAGTGGAGGACTGTTCATTATGCCAAACAAAACTGCCTCATGCACATTCCGATTCAGTGGTTCAAGATCAACATATTAATGGTGCAGGATCAATTCCTGATTCAGTCCCAGCTTATCATAGTCTCCCCACGGAGGACAATTCAAGAGCTCAAGCTACAAACAATGTTATGTCAAGGGAAGGTATTGCTGAACAAGTGTCCCAGGCCAAACCACAGGTTATTAGAAAACCGGAGTCCCCAGATGGACTAACTTGTACTGAAAAAACTGCACCTCCTCAAAATCTTGAGCCACAACCTGAGGGAGTTAGAATTTTTACGCAAAAGCTAGATGGTTCTGATTATCCTAGAAATTCAACTATGTACGAAACCATTGGAAGGACAGGGGGGAAACAATGTCCAACACTGTCTCCAATTGATGGGCTCATGGGAAGTTCACCACTATCTTATATTGATGATGTTGCCCTCCGGCATATGTCTCCAGTTGAAAACTCGAGTAAACAGGATGTGTTTGTGAATAAAACTGGCCATAACAATATTTCTAGAGTTGATGGGAATGGGACAGCTACACAAACTTCAGAATGCATGGCCCAAGGATCTCCAAAAGAATATACTACTGAGCTTTCTGGTGTTGTACCAAAGTCAGAGTTGGTGGATAAGATTACACAGGACAATCTGAAACCTATTGATGGAAGGATGGACACCCTCAACGTCCGCATTCCTGAAGTTCATGTGAGTAATGATCGCTGCTTTCAGCAGGTTGATAAATCTAGCGGGGTTGCTAGGGTTCCTAGTATGCTGCCTTCTTCTACAGAAATTTTGTATGCCCATAATTCTAGGCCAGGGGAATACAATGAGGATTCGACAAACTCACTTTTCAGCAATCAAGATCCTTGGAATATACAGCATGGTACCTTCTTTCCAATTGCTAGACCTAACAAAGCTGTTTTGAAGAAAGAAACCTATTCTCATGGGCATGACTTTGGTGAGTTTCCAGGCAACTCTGGCGAACAAAATTTAGGAGCACAATTTGATGATGGCCTCTACCAGTCTTTGAAACAGCATTTACCTTTAGAACATGTTCGATCTGCCAAAGATGTAGCAGCTTCTGTTCTGCACTCAAGAATTCCTTCAAATCCTGACTTGCATGCAAGGGACAATATGTACCTTGAAAACACAGAGGATGGTGAAGATAAAAACAATCTGATAGATGTTTCTGAAACTCAGAGCATCAAGAGCAAGCAACCAGAAACGACAAATTTTGGCTTTCCAGCATCAGATGTTGGAGGATTGCAGGTAATAAAGAACTGTGACCTTGAAGAGCTTACAGAATTAGGATCTGGTACATTTGGGACTGTGTATCATGGAAAATGGAGAGGCACTGATGTTGCAATCAAGCGGATTACTGATAGGTGCTTTGCAGGAAAGCCTTCAGAGCAAGAGCGAATGAGAGCTGACTTCTGGAATGAGGCAATCAAGCTTGCTGACTTGCACCACCCAAATGTGGTGGCATTCTATGGTGTTGTCCTTGATGGCCCAGGAGGTTCTGTGGCAACAGTAACTGAATATATGGTTAATGGTTCTCTAAGAACTGCCTTGCTGAAGAATGGGAGGAACCTTGACAAGCGCAAGCGACTCTTGATTGCAATGGATGTGGCCTTTGGTATGGAGTACCTGCATGGAAAAAACATAGTTCACTTTGACTTGAAAAGTGATAACTTGCTTGTGAATCTCCGAGATCCCCACCGCCCAATATGCAAGGTTGGTGACTTGGGTCTTTCCAAAGTGAAGCGTCAGACACTGATCTCTGGTGGTGTGAGAGGAACTCTACCTTGGATGGCTCCAGAGCTGCTGAATGGGAGCAGCAGCCTTGTTTCGGAGAAGGTTGATGTTTTCTCATTTGGTATTGTGATGTGGGAACTCTTGACTGGAGAAGAGCCATACGCTGATTTGCATTATGGTGCCATTATAGGTGGTATTGTGAGCAACACTTTGCGCCCTCCAGTTCCGGAATCTTGCGATTCAAAATGGAGGTTGTTGATGGAGACTTGCTGGTCCTCAGAACCATCGGAGAGACCTAGCTTCACTGAGATTGCCAATGAATTGCGATCCATGGCGACCAAGATCACTGCCAAAGGTCAAGCCCAACAGCAGCAGCAACCCTCTTCCTTGCAGAGCCAAGTGCAGAAATGA 4023 0.4609 MAFDQNSVTKDLRPLNVATTLAMAEEHFVSPPTTATATTPPTPNSGREMGSPGTPQVPLFYSPTVSDGATLVGLSYGNVPSTAGTTWCLRPAMSIAHPNANPAIGFNYGHSCCNRVAPGNATLNLGNWVGTNGAMDKACNDAGNGFPAYGGLRINRVVANATDQATYGHTAGHRADHVVEDGGGSGGGVDESVSGRKVKFLCSFGGRILPRPSDGMLRYVGGKTRIISVRRDVRFNDLMQKMVDTYGQPVVIKYQLPEEELDALVSVSCPDDVEHMMEEYEKLMERSPDGSAKLRVFLFSAADLEISGGMHFADLQDSGQRYVEAVNGIADEISIGITRKESVTSAASTQNSDLSGSETLDSLISGDVSAVPKGNVAASSDTPSNLMASEASGASAVLMGMSAARTPTHAPYFHNEVDLERSIPATMSQQSVGLQQSGMEVPYSSPYLQPFFDLRQEVMNYADYVQMPPQTGFRNAQLLGKTGQVFTQPQFHDNNPGSASHQVIPGMQMTFTQQGMPSHVGVRSNVVQPQPVMQLQQNRSEQYNDENTSGMRIFQLPTEQGYNTYQVPMNRVPSVIVGGNYGWVQVPSQDQVVYSDGLLPQQQVMVPEKSQRVEDCSLCQTKLPHAHSDSVVQDQHINGAGSIPDSVPAYHSLPTEDNSRAQATNNVMSREGIAEQVSQAKPQVIRKPESPDGLTCTEKTAPPQNLEPQPEGVRIFTQKLDGSDYPRNSTMYETIGRTGGKQCPTLSPIDGLMGSSPLSYIDDVALRHMSPVENSSKQDVFVNKTGHNNISRVDGNGTATQTSECMAQGSPKEYTTELSGVVPKSELVDKITQDNLKPIDGRMDTLNVRIPEVHVSNDRCFQQVDKSSGVARVPSMLPSSTEILYAHNSRPGEYNEDSTNSLFSNQDPWNIQHGTFFPIARPNKAVLKKETYSHGHDFGEFPGNSGEQNLGAQFDDGLYQSLKQHLPLEHVRSAKDVAASVLHSRIPSNPDLHARDNMYLENTEDGEDKNNLIDVSETQSIKSKQPETTNFGFPASDVGGLQVIKNCDLEELTELGSGTFGTVYHGKWRGTDVAIKRITDRCFAGKPSEQERMRADFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRTALLKNGRNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKRQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVSNTLRPPVPESCDSKWRLLMETCWSSEPSERPSFTEIANELRSMATKITAKGQAQQQQQPSSLQSQVQK 1340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02343 1340 SMART serkin_6 1049 1320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g02343 1340 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 881 1319 - -
Adu01g02343 1340 ProSiteProfiles Protein kinase domain profile. 1049 1316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g02343 1340 PRINTS Tyrosine kinase catalytic domain signature 1168 1186 IPR001245 GO:0004672|GO:0006468
Adu01g02343 1340 PRINTS Tyrosine kinase catalytic domain signature 1283 1305 IPR001245 GO:0004672|GO:0006468
Adu01g02343 1340 PRINTS Tyrosine kinase catalytic domain signature 1131 1144 IPR001245 GO:0004672|GO:0006468
Adu01g02343 1340 PRINTS Tyrosine kinase catalytic domain signature 1239 1261 IPR001245 GO:0004672|GO:0006468
Adu01g02343 1340 SUPERFAMILY Protein kinase-like (PK-like) 1043 1311 IPR011009 -
Adu01g02343 1340 Pfam Protein tyrosine and serine/threonine kinase 1052 1312 IPR001245 GO:0004672|GO:0006468
Adu01g02343 1340 MobiDBLite consensus disorder prediction 686 709 - -
Adu01g02343 1340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1174 1186 IPR008271 GO:0004672|GO:0006468
Adu01g02343 1340 MobiDBLite consensus disorder prediction 1319 1340 - -
Adu01g02343 1340 CDD PB1_UP2 201 299 - -
Adu01g02343 1340 MobiDBLite consensus disorder prediction 170 190 - -
Adu01g02343 1340 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 179 871 - -
Adu01g02343 1340 MobiDBLite consensus disorder prediction 31 52 - -
Adu01g02343 1340 Gene3D Transferase(Phosphotransferase) domain 1 1137 1340 - -
Adu01g02343 1340 CDD STKc_MAP3K-like 1055 1312 - -
Adu01g02343 1340 SUPERFAMILY CAD & PB1 domains 213 303 - -
Adu01g02343 1340 ProSitePatterns Protein kinases ATP-binding region signature. 1055 1086 IPR017441 GO:0005524
Adu01g02343 1340 MobiDBLite consensus disorder prediction 27 52 - -
Adu01g02343 1340 Gene3D Phosphorylase Kinase; domain 1 1042 1136 - -
Adu01g02343 1340 PANTHER SERINE-THREONINE PROTEIN KINASE 179 871 - -
Adu01g02343 1340 PANTHER SERINE-THREONINE PROTEIN KINASE 881 1319 - -
Adu01g02343 1340 Gene3D - 218 301 - -
Adu01g02343 1340 Pfam PB1 domain 217 300 IPR000270 GO:0005515
Adu01g02343 1340 SMART PB1_new 212 301 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02343 Adu-Chr1 90884987 90890518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02343 196 673 MAP Kinase Kinase Kinase AT3G46920 38.821 1.03e-83 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Adu01g02343 PK_Tyr_Ser-Thr 5.2e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02343 - - gmx:100819234 1469.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02343 01 90884987 90890518 Adu03g02483 03 75103586 75111500 PCT