LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu01g02324	ATGCTGCGGTGTTCTTGTACCACAAAAACTCCCATCTTCCTCTTCCTCTTTCTCATCTTCCACTTTCAGATTCTCTTCTACCAAGCACACTCTTGGATAAAAGCTGGTTACTGGTTTTATGGTTCTGAATTTCCCGTTTCTAACATAGAAACTTCTCTCTACACTCACCTCCTATGCGCTTTTGCTGATGTCAACGCTTCAACCTATGAACTTTCCATCCCTTCCGATGCTGCAGCATCATTTCCTTCTTTCACAGCCACTCTCAAGCACACCAATCCATCTCTCTCTACACTTCTTTCCATCGGTGGTGGTACTGCTGACCACACTGTCTTATCTTCCATGGTAAGCAATGCTTCTTCAAGAAAATCATTCATTCACTCTTCAATAACACTCGCTAGAACCTATGGCTTCCAAGGCCTTGATCTTTCATGGGTTTCTGCTAACACTACCAATGACTTGAAAAACATGGGACTGTTCTTTCAAGAGTGGAGAGAAGCTGCAAAATCTGAGGCAGTAAACTCCAGCAACAATAATAATCAAGAACTGATTTTAACTGCGGCTGTTCCATATCAACCAGGTTCTGATTTTGGTTCTTACCCTGTGGAGTCTATCAGTGATAACTTGAATTGGGTAAATGTTTTGGATTATGATTACTACACACCTCAATCAACAAATTTCACTGGAGCTCATTCAGCCTTGTATGATCCTTCTAGTGATGTCAACACAGACACCGGAATCAAGCGATGGATAGATAGTGGGGTATCTGCTAGTAAGTTGGTTTTGTCGTTACCATTCTATGGATATGCATGGAAGCTTAGGAACCAAAGGGAGAATGGAATAGGTGCAGCAGCAACAGGTCCAGCAATCACAAAAGAAGGAGACATGACCTACAAGGATATCAAGGATTATGTTCAAAGATATGAAGCAACTGTGTTGTATAATGCTACTTACGTGGTCAATTATTTTTCAGTTGGGTCAAATTGGATAGGATTTGATGATGTGAATGCTGTTAAAACCAAGGTGTCTTATGCTAAAGAAAAGAAACTAGGTGGTTATGTTGTATGGCAAGTTCCCTATGATGATGACAAATGGCAGCTTTCTAGTGCTGCAGCTCAACAGGTGGTTGGCGGCGGAGAACACCATAATTGGCGGTTACCGGTGGTGATCACTTTGACAAGTGCTGTATGTATTATTCTGTTGGGTTTCATAATTTACTACATAAGAAGGAGACTAGTAAAACCAAAGGGAATCATGATTGCGGCTAGAGATGCAGGACATTTTCCTGATTGTGTTCCTGATGTGCAAGTCTTTAGCTTATGTGATATTGAGTTAGCCACTAATAGATTTTCGATTGAAAACAAGCTTGGTCAGGGTGGCTATGGTCCTGTTTACAAGGGAATATTACCAGATGGCAGGGAAATAGCAGTGAAGAAGTTATCAAAGACTTCATCACAAGGGTTTGAAGAATTCAAGAATGAGGTAACACTCACTGCAAGGCTACAGCACGTGAATCTTGTTCGGTTGTTGGGTTTTTACATTGATAGAGAAGAACAGATGCTGGTGTATGAGTACATGCCAAACAAAAGCCTTGACTACTATCTATTTGACCCTATCAGGCGGCTTCTTCTGGATTGGAGCAAGCGTGTAGCTATTATTGAGGGTGTTACTCAGGGACTACTTTATCTACAAGAATATTCTAGATTAACAATAATTCATAGAGATATAAAAGCTAGCAACATTCTGTTAGATGGTGAGATGAAACCAAAGATTTCAGATTTTGGTATGGCAAGAATATTCTCAAAAGATGAGCAAGAAGCAAACACGGCCAAGATTGTTGGAACATATGGTTACGTATCTCCTGAATACCTTAAAAAAGGCTTGTATTCGGTAAAATCCGATGTGTATAGCTTTGGAGTTCTACTTCTGCAGATTATAGGTGGCAAAGTAACAAGATATTATGGCGAGCACGAAAACTTAACCTTGATGGAATATGCTTATGATTTGTGGAAAGAAGGAAGAGGCATGGAGTTTGCGGATCCTTTTCTTGATGACACAGCTTCAGACTGCAAAATATTGAGGTGCATACAAATAGGTCTATTATGTGTGCAAGAAGATGCCAATGACAGGCCTTCTGTGTTGGAAATTTCTTCAATGTTAAGAAGTGAAACTGTTCTTGCTACACCAAAGAAGCCAGCGTTTTCAAGAGAAAAAGACATGCAGGAGCACGGTGAATTTGTTATGAAGCAAGAACATTATTCGGTTAACGAAGCAACAATGTCTGAGACTGTAGCAAGATAG	2298	0.4034	MLRCSCTTKTPIFLFLFLIFHFQILFYQAHSWIKAGYWFYGSEFPVSNIETSLYTHLLCAFADVNASTYELSIPSDAAASFPSFTATLKHTNPSLSTLLSIGGGTADHTVLSSMVSNASSRKSFIHSSITLARTYGFQGLDLSWVSANTTNDLKNMGLFFQEWREAAKSEAVNSSNNNNQELILTAAVPYQPGSDFGSYPVESISDNLNWVNVLDYDYYTPQSTNFTGAHSALYDPSSDVNTDTGIKRWIDSGVSASKLVLSLPFYGYAWKLRNQRENGIGAAATGPAITKEGDMTYKDIKDYVQRYEATVLYNATYVVNYFSVGSNWIGFDDVNAVKTKVSYAKEKKLGGYVVWQVPYDDDKWQLSSAAAQQVVGGGEHHNWRLPVVITLTSAVCIILLGFIIYYIRRRLVKPKGIMIAARDAGHFPDCVPDVQVFSLCDIELATNRFSIENKLGQGGYGPVYKGILPDGREIAVKKLSKTSSQGFEEFKNEVTLTARLQHVNLVRLLGFYIDREEQMLVYEYMPNKSLDYYLFDPIRRLLLDWSKRVAIIEGVTQGLLYLQEYSRLTIIHRDIKASNILLDGEMKPKISDFGMARIFSKDEQEANTAKIVGTYGYVSPEYLKKGLYSVKSDVYSFGVLLLQIIGGKVTRYYGEHENLTLMEYAYDLWKEGRGMEFADPFLDDTASDCKILRCIQIGLLCVQEDANDRPSVLEISSMLRSETVLATPKKPAFSREKDMQEHGEFVMKQEHYSVNEATMSETVAR	765

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu01g02324	765	SUPERFAMILY	Chitinase insertion domain	266	331	IPR029070	-
	Adu01g02324	765	SMART	serkin_6	449	724	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu01g02324	765	ProSiteProfiles	Protein kinase domain profile.	449	725	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu01g02324	765	SUPERFAMILY	(Trans)glycosidases	34	376	IPR017853	-
	Adu01g02324	765	Gene3D	-	265	331	IPR029070	-
	Adu01g02324	765	Gene3D	Phosphorylase Kinase; domain 1	425	524	-	-
	Adu01g02324	765	Pfam	Glycosyl hydrolases family 18	35	360	IPR001223	GO:0005975
	Adu01g02324	765	ProSiteProfiles	Glycosyl hydrolases family 18 (GH18) domain profile.	32	377	IPR001223	GO:0005975
	Adu01g02324	765	SMART	2g34	32	360	IPR011583	GO:0008061
	Adu01g02324	765	CDD	GH18_plant_chitinase_class_V	31	366	-	-
	Adu01g02324	765	SUPERFAMILY	Protein kinase-like (PK-like)	431	725	IPR011009	-
	Adu01g02324	765	Gene3D	Transferase(Phosphotransferase) domain 1	525	738	-	-
	Adu01g02324	765	Gene3D	Glycosidases	46	361	-	-
	Adu01g02324	765	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	26	761	-	-
	Adu01g02324	765	CDD	STKc_IRAK	455	719	-	-
	Adu01g02324	765	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 19	26	761	-	-
	Adu01g02324	765	Pfam	Protein kinase domain	450	715	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu01g02324	765	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	570	582	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu01g02324	Adu-Chr1	90652485	90655651	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu01g02324	385	733	Receptor kinase-like Gene Family	AT4G05200	50.843	2.04e-110	349

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Adu01g02324		Glyco_hydro_18	1.8e-65	CL0058

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu01g02324	-		-	gmx:100787480	1014.6