Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02300 ATGGAGCAGATTAAGAGAGAGATCTCGGTGATGAAGATGATGAAGCATCCTCATATCGTTGCGCTCCACGAAGTAATGGCTTCCAAATCCAAGATCTACATCGCCATGGAGCTCGTCCGGGGCGGCGAGCTCTTCAACAAAATTGCCACAAGGGGACGCATGAGGGAGGACCTTGCGAGGCTCTACTTCCACCAGCTTATCTCCGCCGTCGATTTCTGCCACAGCCGTGGCGTCTACCACCGCGATCTCAAGCCGGAGAATCTCCTCCTTGACCACAACGGCAACCTCAAGGTCTCTGACTTCGGACTCAGCACTTTCTCCGAGCATCTCCGCCAGGACGGCTTGTTGCACACAACTTGCGGCACTCCGGCATACGTCTCGCCGGAGGTGCTCGCGCGGAAGGGATACGACGGCGCCAAGGCCGATATATGGTCCTGCGGCGTCATCCTGTTTGTGCTTCTTGCAGGTTGCTTGCCTTTTCAGGACGATAACCTTGTTGCGATGTACAAGAAGATTTACAGAGGAGATTTCAGGTGTCCGCCGTGGTTCTCCGGCGATGCAAGGAGGCTCATCACCAAGCTGCTCGATCCGAACCCGAATTCTCGCATCACCATTTCGAAAATCATGGAGTCACCGTGGTTCAAGAAACCTGTTCCGAAGAACATGCTACGGGGGATGAAGGAGGAAGACGAAGAGGAGAAGGAGAAAGAGATAGAGGAGAAGATGAAGCAGCCATCGACGATGAACGCGTTTCACATAATATCGTTATCCGAAGGGTTTGATTTGTCGAGGTTGTTCGAGGAGAAGAAGAGGGAGGAGAGGGAGGAGATGAGGTTTGCGACGGCGGGGACGGCGAGCAGCGTGATATCTCGACTGGAGGAGGTGGCGAAGGCGGTGAAGTTCGACGTGAAGAGGAACAGCGATGAGACGAAGGTGAGGCTGCAGGGGCAGCAGAGAGGAAGGAAGGGGAAGCTGGCAATTGCGGCGGATATATACGCCGTGACGCCGTCATTCCTGGTGGTGGAGGTGAAGAAGGATAACGGTGACACTTTGGAGTACAACCAGTTCTGCAGCAAGGAGCTTCGCCCTGCACTCAAGGATATCTTCTGGACTTCCCCACCTGAGAATACCACACCTGCTTAA 1143 0.5433 MEQIKREISVMKMMKHPHIVALHEVMASKSKIYIAMELVRGGELFNKIATRGRMREDLARLYFHQLISAVDFCHSRGVYHRDLKPENLLLDHNGNLKVSDFGLSTFSEHLRQDGLLHTTCGTPAYVSPEVLARKGYDGAKADIWSCGVILFVLLAGCLPFQDDNLVAMYKKIYRGDFRCPPWFSGDARRLITKLLDPNPNSRITISKIMESPWFKKPVPKNMLRGMKEEDEEEKEKEIEEKMKQPSTMNAFHIISLSEGFDLSRLFEEKKREEREEMRFATAGTASSVISRLEEVAKAVKFDVKRNSDETKVRLQGQQRGRKGKLAIAADIYAVTPSFLVVEVKKDNGDTLEYNQFCSKELRPALKDIFWTSPPENTTPA 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02300 380 SMART serkin_6 2 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g02300 380 Coils Coil 220 240 - -
Adu01g02300 380 Gene3D Kinase associated domain 1, KA1 244 371 - -
Adu01g02300 380 SUPERFAMILY Protein kinase-like (PK-like) 2 215 IPR011009 -
Adu01g02300 380 Pfam NAF domain 245 304 IPR004041 GO:0007165
Adu01g02300 380 ProSiteProfiles Protein kinase domain profile. 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g02300 380 Gene3D Transferase(Phosphotransferase) domain 1 44 243 - -
Adu01g02300 380 ProSiteProfiles NAF domain profile. 243 267 IPR018451 GO:0007165
Adu01g02300 380 Gene3D Phosphorylase Kinase; domain 1 1 43 - -
Adu01g02300 380 CDD CIPK_C 249 366 - -
Adu01g02300 380 Pfam Protein kinase domain 2 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g02300 380 PANTHER - 1 378 - -
Adu01g02300 380 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 378 - -
Adu01g02300 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 78 90 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02300 Adu-Chr1 90505658 90506800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02300 1 374 CBL-interacting serine-threonine protein kinases AT4G30960 71.958 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Adu01g02300 Pkinase 7.2e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02300 - K07198 gmx:547644 607.831