Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02295 ATGGCTATGCTCCGAAAATTGTTCTTTCGAAAACCCCCCGATGGCCTTCTCGAGATCTGTGAACGAGTCTATGTATTTGATTGCTGCTTCACCACTGATGCTTGGAGCGAAGAGAATTACAAAGTTTACATTGATGGTATAGTTGGTCATCTTAGGGAGAACTTGCAAGATGCTTCAATTCTTGTTTTCAATTTCAGAGAGGAAGACACCAAAAGCGTTATGGCAGATATATTATCTGAGTATGACATTACTATTATGGACTATCCGCGGCACTACGAGGGTTGCCCTGTGCTCAAGATGGAGCTCATTCACCATTTCTTAAGGTCTGGTGAGAGTTGGCTCTCTCTTGGGCAGCACAATGTGTTGTTAATGCATTGTGAGCGTGGAGGTTGGCCTGTTTTGGCCTTCATGCTAGCTGCATTGTTGATTTTTCGGAAGCTTTATACCGGGGAGCAACGGACTTTGGATATGGTGTATAAGCAGTCTCCCCGCGAGCTTTTACATTTGCTGACACCCTTGAATCCGATCCCTTCGCAGCTGAGGTATCTGCAGTATGTTTCAAGAAGGAATGTGGCCATAGATTGGCCACCGTTGGACAGGGCGCTCATGTTGGACTGCATCATCCTTAGATTCATCCCAAATTTCGATGGAGAAGGAGGCTGCCATCCCTTGTTTAGAATTTATGGGCAGGACCCTTTTAGTGGAGACAAGAATCCGAAAATGTTGTACTCAACGCCCAAGAGAAGCAAGAATATCCGGTGTTACAAGCAGGGAGAGAGTGAACTAATTAAGATTGATATCAGTTGCCATATTCAAGGTGATGTTGTGGTTGAGAGCACTAACTTGAACACTGATATGGAGCAAGAAATGATGATGTTCCGAGTAATGTTCAACACTGCTTTTGTTAGATCTAATATTATGATGCTTAACCGGGATGAAGTTGACATTTTATGGGATGGTAAAGATCACTTTCCAAAGGATTTCAGAGCTGAGATCCTTTTCTCAGAAATGGATGCTGCTGCAGCTGTTATGGTGGATCGCACCTCATGCTTCGAGGAGAAGGAAGGACTGCCAGTGGAAGCATTTGCCAAGGTTCAAGAGATTTTTAACTATGTGGACTGGTTGGACCCCAATGCAGATGCTGCACTAAATGTTCTCCAACAGATGACTGCTTCGGCTATCATTAACGACAAGTTGGATACAGTTTCTGATCAGCATGGAGAAATGGGCACAATGCCTCAGGGGAAAATGAGTAAGCAATCCCCGGAAAATGAGAAGAGTAAAAAAGGTGACATGGCCAGCAAAGTTGATGCTACTCCAAAGGCATCTGATATTTCTTATTTGCCTGGTTCTATGGAAGCTTCTTTTTCCCCAGAAACTCCTCCTTTACGGCCTGCCCGAACTAGATTAGGCAAAACATTTCATGATTCTCTTCCCCATACAGAAGTCAGTCATCAACTTGTTATTGATGAAACTGAAGCCCAATTACAAGATAGAAGTCTGTCACCTATTTCTAGGTTTGCACCTGAGAGTCAATCGTCACCTACCTCTTGTAGTAAGTCACCAACTGATACCATCACCCTGGCTTCAAATTCAGGTACTACTTCAGTTCAGCCACCCCCTGCACTTTCTCCCAGAACACCGTTGAAGGAGATTCCACCTGTAAAAACAAGACTCGAGTCATCCTCACCGCCTCCACCCCCTCTTCCTCCTACTCCTCCTCCAAAGGATCATAAACCAGCTATAGTTAGACCTCCTCCACCTCCGCCACATCCTTCAAAGAATGATCTACATGTTATAGAAGGAACCCCTCCTCCACCATCACCTGCTTTAAAGGAAGAGCCACAGATAAAAGCTAGACACCCTCCTCCTCCTCCTCCTCCACCTCCTGCAAAGGATGATTCACAGGTTAGAGCTAAATCCCCTCCACCACCGCCACCACCTCCTTGTCTCTCTGTCAAAGCTGAAGCTCCTAGTACACCATCAGCAGCACCACCGCCGCCGCTGCCGCCACTGCCACCATCTGCATCATTTCCCTCCAATAAGCCCAATCCTTCTGCACCAGCTGCCCCTCCACCTCCTTCTGCACCAACTGCTCCACGACCTCCTTCTGCACCAGCTGCTCCACCACCTCCTGCTCCCTTTGGCAAGGGAGGTTCAAACCCCAGCAATGGTTTTCCAGGGTCTCTTTCGGATGGATCCGGCTCAAAGGGACGGATTCTGTCACGTACTATTAGTTCAAAGAATAATGGCAAAAAGCTGAAGCCATTGCACTGGTTGAAACTATCTAGGGCGGTGCAAGGAAGTTTGTGGGCTGAGACACAGAAATCGGGTGAAGCTTCCAAAGCCCCAGAGATTGACATGTCAGAGCTTGAGAGTCTCTTCTCAGCAGCAGCCCCAAGTTCAGGTTCAACCAAGAAATCAAATTCCCAAAGCTCAGTTGGGCCTAAATCTGATAAAGTGCAGCTGATTGAGCATAGGCGAGCATACAATTGTGAAATCATGCTTTCAAAAGTGAAGGTGCCATTGCATGAATTAATGAGCTCAGTGCTAGCACTGGAAGAGTCAGCACTAGACATTGATCAGGTTGAGAATATCATAAAGTTTTGTCCTACGAAAGAAGAGATGGAATTACTTAAGGGTTATACAGGGGAAAAGGAGAAGTTAGGGAGGTGTGAACAGTTCTTCTTAGAGTTGATGCAAGTACCACGGGTAGAATCCAAGCTCAGAGTTTTCTCATTCAAAATTCAGTTCCAAACTCAGGTTGCTGACCTTAGAAATAACCTGAATGTTGTGAATGCTGCAGCAGATGAGATCAGAGGTTCTGTCAAATTTAAGAGAGTTATGCAAACCATACTTTCCCTGGGCAATGCTTTGAACCAGGGAACTGCCAGGGGTTCAGCCATTGGATTCAGATTGGATAGTCTTCTGAAGCTTACTGAAACACGTGCACGGAACAAGAAGATGACTCTCATGCATTATCTTTGCAAGGTGCTGGCTGATAAACTACCAGAAGTTTTAGACTTCTCCAAGGATGTTGCTAACCTAGAGCCAGCAGCAAAGATCCAATTGAAAATTCTGGCAGAGGAGATGCAAGCTATAAGCAAAGGATTAGAGAAAGTTGTGCAGGAATTATCGATCTCTGAAAATGATGGTCCGATGTCAGAGACTTTCCGCAAGAATTTGAAAGGGTTCCTCTCTCATGCTGAAGCTGAAGTCCGTTCATTGGCTTCACTATATTCTCGCGTGGGTAGGAATGTAGACACGTTGATTCTTTATTTTGGGGAAGATCCATCACGGTGCCCTTTTGAGCAAGTTGTCAATACTCTGCTCAACTTCACTGGAATGTTTAATAAAGCACATGAAGAGAACAGCAAGCAGCTAGAGCTTGAAATGAAGAAAACAGCAGACAGTGACAAAAAGAAGTGTGAACAAGAAAAGATAATACCGGCAGCAATCCGGACCGGCAACGTCCAATGA 3480 0.454 MAMLRKLFFRKPPDGLLEICERVYVFDCCFTTDAWSEENYKVYIDGIVGHLRENLQDASILVFNFREEDTKSVMADILSEYDITIMDYPRHYEGCPVLKMELIHHFLRSGESWLSLGQHNVLLMHCERGGWPVLAFMLAALLIFRKLYTGEQRTLDMVYKQSPRELLHLLTPLNPIPSQLRYLQYVSRRNVAIDWPPLDRALMLDCIILRFIPNFDGEGGCHPLFRIYGQDPFSGDKNPKMLYSTPKRSKNIRCYKQGESELIKIDISCHIQGDVVVESTNLNTDMEQEMMMFRVMFNTAFVRSNIMMLNRDEVDILWDGKDHFPKDFRAEILFSEMDAAAAVMVDRTSCFEEKEGLPVEAFAKVQEIFNYVDWLDPNADAALNVLQQMTASAIINDKLDTVSDQHGEMGTMPQGKMSKQSPENEKSKKGDMASKVDATPKASDISYLPGSMEASFSPETPPLRPARTRLGKTFHDSLPHTEVSHQLVIDETEAQLQDRSLSPISRFAPESQSSPTSCSKSPTDTITLASNSGTTSVQPPPALSPRTPLKEIPPVKTRLESSSPPPPPLPPTPPPKDHKPAIVRPPPPPPHPSKNDLHVIEGTPPPPSPALKEEPQIKARHPPPPPPPPPAKDDSQVRAKSPPPPPPPPCLSVKAEAPSTPSAAPPPPLPPLPPSASFPSNKPNPSAPAAPPPPSAPTAPRPPSAPAAPPPPAPFGKGGSNPSNGFPGSLSDGSGSKGRILSRTISSKNNGKKLKPLHWLKLSRAVQGSLWAETQKSGEASKAPEIDMSELESLFSAAAPSSGSTKKSNSQSSVGPKSDKVQLIEHRRAYNCEIMLSKVKVPLHELMSSVLALEESALDIDQVENIIKFCPTKEEMELLKGYTGEKEKLGRCEQFFLELMQVPRVESKLRVFSFKIQFQTQVADLRNNLNVVNAAADEIRGSVKFKRVMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARNKKMTLMHYLCKVLADKLPEVLDFSKDVANLEPAAKIQLKILAEEMQAISKGLEKVVQELSISENDGPMSETFRKNLKGFLSHAEAEVRSLASLYSRVGRNVDTLILYFGEDPSRCPFEQVVNTLLNFTGMFNKAHEENSKQLELEMKKTADSDKKKCEQEKIIPAAIRTGNVQ 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02295 1159 MobiDBLite consensus disorder prediction 403 469 - -
Adu01g02295 1159 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
Adu01g02295 1159 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Adu01g02295 1159 Pfam Formin Homology 2 Domain 749 1117 IPR015425 -
Adu01g02295 1159 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 337 IPR035892 -
Adu01g02295 1159 Gene3D Protein tyrosine phosphatase superfamily 15 198 IPR029021 -
Adu01g02295 1159 ProSiteProfiles Formin homology-2 (FH2) domain profile. 744 1143 IPR015425 -
Adu01g02295 1159 Coils Coil 1118 1138 - -
Adu01g02295 1159 SMART PTEN_C2_2 197 336 IPR014020 -
Adu01g02295 1159 MobiDBLite consensus disorder prediction 559 594 - -
Adu01g02295 1159 PANTHER FORMIN-J 1 1142 - -
Adu01g02295 1159 SUPERFAMILY Formin homology 2 domain (FH2 domain) 819 1136 - -
Adu01g02295 1159 MobiDBLite consensus disorder prediction 620 717 - -
Adu01g02295 1159 MobiDBLite consensus disorder prediction 797 819 - -
Adu01g02295 1159 SMART it6_source 744 1159 IPR015425 -
Adu01g02295 1159 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Adu01g02295 1159 Gene3D - 199 340 - -
Adu01g02295 1159 MobiDBLite consensus disorder prediction 722 751 - -
Adu01g02295 1159 MobiDBLite consensus disorder prediction 421 435 - -
Adu01g02295 1159 MobiDBLite consensus disorder prediction 797 818 - -
Adu01g02295 1159 MobiDBLite consensus disorder prediction 504 540 - -
Adu01g02295 1159 MobiDBLite consensus disorder prediction 504 752 - -
Adu01g02295 1159 Gene3D Formin, FH2 domain 743 1128 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02295 Adu-Chr1 90418876 90427453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02295 1 400 Protein tyrosine phosphatase (PTP) family AT5G58160 67.082 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02295 - - ahf:112723424 2036.92