Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02288 ATGGCTGAGCAACCAAGCTCCGCCGAAGCTGTCACGGAGGGAGCGCCGGAGCTTCTCCCGAAAGAGAAGGATTCAGAAGGCGGCGAAGGTGGAAACGAACAAGGACAACAAGGGAAGGCATCAGAGGGAGAAGAACGAGCTAGCGAATCGCCTTGCGAAACTGATAAACCTCCGAAGAGTTCTGATAAACCTCCGAAGGGGTCGAATTCGGGAACCCTAGCTGCTGAATCACCTGTTGTGAACAATCGGAGTGATGAATTGCAGGGGAGCCCTGCTACGCCGAATATGGATGTCAAAGCTGAAAGTAAGGAGACAGATGGACCTCGTGAAAAGGAAACTATTGCAAGTGAAGCAGTACAACCACCTCCAACTCAGATAGAAAATCAGCCACAGGTGTCTGCATGTTCAACTCCATTGTCAGAACTGTCACCAACCTCTGTTACACAATCTTTATCATCTGTTCCTAGTCAAATTGCCCCCAAACAGAAAATGCCACCTTTGAAGATTAATAATGTTCATGTGCCACAATTGGACAAAAAAATTCCTTCTGGTGGCAAACATGTTTCTTGTGGTTCTGTTGCAAGGGTTTCAGTTTCTGATGGTTACAGCTGGCGGAAGTATGGTCAGAAGCAAGTGAAGAGTCCCACGGGGTCTCGAAGCTATTACAGGTGTACTCATTCAGAATGTGCTGCAAAGAAGATTGAATGCAATGATGATGCGGGTCGTGTAATAGATGTTGTTTATAAAAGTCAACACAGTCATGATCCCCCACATAAGCCTAATTCTACAAGGGAAAGTAAGTTAGTGTCTTCCAGTGAACCTCCTAATGTAGAAAACAAAGTTTCTCAGCAGCTATCTATCAGAGGTCTGAAAAACTCTGATCCGTCTCCTTCAAAAGAAACCTTACAAGATGCACCTCGCACTGCTGACAAGAAAAGACCAAACTCATCTAATCTCAGTGACAATGGTAAAGTTATTTTGAAGGAGGAGCATGTTAATGAGCCAGAGCCAAAAAAAAGAATGAAGAAAGATGACTTAGCAGACTTGGATTCCCCTGTAAAATCTGGAAAGAAATCGAGGTTTGTTGTACATGCAGAAGGGGATGTAGGTATATCAGGTGATGGATACCGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGGAATCCACATCCGAGAAACTACTACAGATGCACTTCTGCTGGGTGTCCTGTCCGAAAACACATTGAGACTGCTGTTGATAACTCGAACGCTGTCATCATAACATACAAGGGTGTACATGACCATGACATGCCTGTGCCAAAGAAACGACATGGCCCACCCAGTGCTCCTCTTGTGGCTGCTGCAGCTCCGGCATCCATGAACAATTCGCAGTCAAAGAAGAAACCTGATTCTCCTAAAAAACAGAACAAGTCTACTCAATGGTCGGTGGACACTGAAGGAGAACTAAGCGGGGAAGCCATGGATCTTGGAGGTGAAAAGGCAATGGAGTCAGCTCGCACACTTCTGAGCATAGGATTCGAAATTAAGCCATGCTGA 1539 0.4561 MAEQPSSAEAVTEGAPELLPKEKDSEGGEGGNEQGQQGKASEGEERASESPCETDKPPKSSDKPPKGSNSGTLAAESPVVNNRSDELQGSPATPNMDVKAESKETDGPREKETIASEAVQPPPTQIENQPQVSACSTPLSELSPTSVTQSLSSVPSQIAPKQKMPPLKINNVHVPQLDKKIPSGGKHVSCGSVARVSVSDGYSWRKYGQKQVKSPTGSRSYYRCTHSECAAKKIECNDDAGRVIDVVYKSQHSHDPPHKPNSTRESKLVSSSEPPNVENKVSQQLSIRGLKNSDPSPSKETLQDAPRTADKKRPNSSNLSDNGKVILKEEHVNEPEPKKRMKKDDLADLDSPVKSGKKSRFVVHAEGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSNAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPASMNNSQSKKKPDSPKKQNKSTQWSVDTEGELSGEAMDLGGEKAMESARTLLSIGFEIKPC 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02288 512 MobiDBLite consensus disorder prediction 39 62 - -
Adu01g02288 512 MobiDBLite consensus disorder prediction 247 353 - -
Adu01g02288 512 SUPERFAMILY WRKY DNA-binding domain 368 432 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu01g02288 512 SMART WRKY_cls 372 431 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu01g02288 512 SMART WRKY_cls 198 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu01g02288 512 ProSiteProfiles WRKY domain profile. 367 432 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu01g02288 512 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 30 510 - -
Adu01g02288 512 MobiDBLite consensus disorder prediction 429 492 - -
Adu01g02288 512 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 30 510 IPR044810 GO:0003700
Adu01g02288 512 MobiDBLite consensus disorder prediction 63 91 - -
Adu01g02288 512 MobiDBLite consensus disorder prediction 99 113 - -
Adu01g02288 512 ProSiteProfiles WRKY domain profile. 199 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu01g02288 512 MobiDBLite consensus disorder prediction 324 353 - -
Adu01g02288 512 MobiDBLite consensus disorder prediction 248 262 - -
Adu01g02288 512 MobiDBLite consensus disorder prediction 263 303 - -
Adu01g02288 512 Pfam WRKY DNA -binding domain 374 429 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu01g02288 512 Pfam WRKY DNA -binding domain 200 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu01g02288 512 Gene3D WRKY domain 187 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu01g02288 512 Gene3D WRKY domain 356 433 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu01g02288 512 SUPERFAMILY WRKY DNA-binding domain 196 257 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu01g02288 512 MobiDBLite consensus disorder prediction 118 159 - -
Adu01g02288 512 MobiDBLite consensus disorder prediction 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02288 Adu-Chr1 90351790 90355765 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02288 85 512 WRKY Transcription Factor Family AT4G30935 51.264 1.10e-131 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu01g02288 WRKY 1.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02288 - - gmx:100782194 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02288 01 90351790 90355765 Adu01g02288 01 90351790 90355765 ECH