Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02285 ATGCAAGATCTTTCCAACGCAGCTGCCCTCTCATCTACGATCGATAGCGCCGCCCTCTCATCTGCACACAACACAGCCGGTGTTCACTCTTTCAGAATGGCAGAATCGCAAGAAGAACGTGCTGCAAGTGAGGGTCCTCATTTATGCACATCACCTAGCCGAAATTCATTAATGGAGGTTGATATAGTTGAACCGTTAGTTTGTGTTGCCTCTGAAGTTTCTGAAAATTTATCAAACGAACAAGAAAACTTAGCCGCCAATGTCGCAGAGCATGGTCACAAGTCAAACAAGTTGTCGGATGTTATGGATGTTGGAAGTGAAGAGATGGAGCCTGGTGATGAGTTACCAGATCATGGTAACCTACAAGAAGATGAGATACCAAGAGTTGGAATGCGATTTCCTCAGCTACAGATGGCGCATGACTTTTATGTGTCCTATGCAAAGAAAGCTGGATTTGCAACTAAGATAAGGACGACAACATTTGACAAGATCACGAAGGCTCCCATTAACCAGGCTATACACTGTAATCGCGATGGTATCCGCGAGTCTCGTGTTAAAGCACCAACGCGGAAGAATACGATTTCAGCTGCTGGGTGCAAGGCAAGGATATATGTAAAGTTTGATAAAGACGTGCAAGACTGGGTTCTGCTCaaggctaactgcaGAGTTTCTGCAGTTGATGAACAGGGTCCAGTGGTCTGCGTGAAGGTGAAAGAGGAGAAACTACTCAACGATACTATTCTATGCGTTCCGTATGATGTTCACTTTGACCGTTCCACACATGAGCTTCGTTGTGAATGCAATCTTTTTGAGAGTTCAGGTGTGTTATGCTGTCACTGCCTTGAAGTTTTCCATTCGTATAAAGTGTACAAAGTACCGTCCTGTTATATTCTTCCTcgatggagcaagaagataaagcgcaagcatacgtatgtcaaaagtagccatgatgTCAGTCGGTCAGATGAGAGTCATGTTGCATTTAGGGAACTGTGTGCACACTTCTATAATGTTGCTCAAGAGTTCCTCGGTGATGATGAAGAAACAGCATTGCTGCATGTTGCCTTGGAAGAAACAAGGGCCAAGTTGGCTACGCACCGTGCCAAAAAGAGGTCCGAGAGAATGGCAGAGACTCAGACCAACATTGGCTCTCAGAGTTCGAATGATGTCGGTGTTGATGACATCCAAGGCCCATCGAAGGTCACCACAAAGGGCAGGCCAAAGAGTAAGAGGCTTGGCTCTGCCCTTGAGAAGTCCATCAAGAATTCAAGACGGAGAAAACAAAAGAATTCACATCCGGTGGTTCGTCCGCACACATTTCAAGATATAAACCATTGTGATGTTTCTAGCCTGGATGTTCCCAAACAAGACGGTGGTTTCATGTCTTTGTTAAGCTCCTTCAACCAAAAATGGGATTAG 1419 0.4299 MQDLSNAAALSSTIDSAALSSAHNTAGVHSFRMAESQEERAASEGPHLCTSPSRNSLMEVDIVEPLVCVASEVSENLSNEQENLAANVAEHGHKSNKLSDVMDVGSEEMEPGDELPDHGNLQEDEIPRVGMRFPQLQMAHDFYVSYAKKAGFATKIRTTTFDKITKAPINQAIHCNRDGIRESRVKAPTRKNTISAAGCKARIYVKFDKDVQDWVLLKANCRVSAVDEQGPVVCVKVKEEKLLNDTILCVPYDVHFDRSTHELRCECNLFESSGVLCCHCLEVFHSYKVYKVPSCYILPRWSKKIKRKHTYVKSSHDVSRSDESHVAFRELCAHFYNVAQEFLGDDEETALLHVALEETRAKLATHRAKKRSERMAETQTNIGSQSSNDVGVDDIQGPSKVTTKGRPKSKRLGSALEKSIKNSRRRKQKNSHPVVRPHTFQDINHCDVSSLDVPKQDGGFMSLLSSFNQKWD 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02285 472 PANTHER OS03G0843700 PROTEIN 210 366 - -
Adu01g02285 472 PANTHER OS03G0843700 PROTEIN 91 210 - -
Adu01g02285 472 MobiDBLite consensus disorder prediction 33 53 - -
Adu01g02285 472 ProSiteProfiles Zinc finger SWIM-type profile. 252 288 IPR007527 GO:0008270
Adu01g02285 472 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 210 366 IPR031052 GO:0006355
Adu01g02285 472 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 91 210 IPR031052 GO:0006355
Adu01g02285 472 MobiDBLite consensus disorder prediction 377 393 - -
Adu01g02285 472 Pfam FAR1 DNA-binding domain 141 217 IPR004330 -
Adu01g02285 472 MobiDBLite consensus disorder prediction 365 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02285 Adu-Chr1 90304429 90308517 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu01g02285 FAR1 2.2e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02285 - - aip:107640004 490.73