Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02282 ATGGGTAGCCAGCAGGACAAACTTTACAGGTTGGAAGTCTTTGATTCTAGACTATCTTCGTCTACTGATGCTGGAGTTAAAAAATCTGGATTTAGTATTGATAAATTAAGCAATAGTGGTCATGGAAGCTGCACAACCTCTAGGTCCTTTAAAAGAGGAATGAGAAAGGGATCTGAAGGGCTGAAATCAATTGGCCGATCACTTGGATTTGGGGTATCTAAGGCAGTGTTTCCAGAAGATCTTAAAGTGTCTGAAAAGAAGATATTTGATCCTCAAGACAAATTTTTGCTCTTATGGAATAAACTTTCTGTTATCTCATGCATTTTGGCTGTGTCTGTGGATCCGCTGTTCTTTTATCTTCCTGTCATTGATGATCAAGCACACTGTGTTGGCATAGACCGAAAGTTGGCAGTTATAGCTACAACCTTAAGGACAGTCATTGATGCTTTCTATCTTATACACATGGCGCTCCAATTTCGTACTGCATATATTGCTCCATCATCTCGTGTCTTTGGACGGGGTGAGCTGGTCATAGATCCGGCACAGATAGCCAAGCGTTACTTGCAGCGATATTTCATCATTGATTTCCTATCTGTATTTCCCTTACCACAGATTGTGGTTTGGAGATTTCTTCTGAGGTCAAATGGTTCAGATGTACTTCCAACAAAGCAGGCCTTGCTGTATATTGTCTTGTTTCAGTATGTTCCCAGATTTTTCCGAATGGTTCCATTGACTTCAGAACTTAAAAGAACAGCTGGTGTATTTGCTGAAACCGCGTGGGCTGGTGCTGCATATTACTTGCTGCTATATATGCTTGCCAGTCATATAGTTGGAGCATTTTGGTACTTGTTAGCAATTGAACGCAACGACTTTTGCTGGCAGAAGGCTTGCCGCAATGATTGCAACAAAAACTTCCTGTATTGTGGCAACCAAAACATGGTAGGTTATGCTGCCTGGAAGAATATAAGTGACAGTACTCTTAAGTTAAAATGTGCTGCAGATGGGGACAATCCACCTTTTGATTATGGAATTTTTAACCAAGCTTTGACATCTGATATTGTTTCATCATCTAAGAATTTCTTCTCCAAATACTGTTACTGTTTATGGTGGGGGCTGCAGAATCTGAGTACACTTGGTCAGGGGCTTCAAACTAGCACCTATCCTGGTGAGGTTATATTTTCTATAGCACTAGCTATTGCTGGACTCATTCTCTTTGCACTTCTGATTGGCAACATGCAGACATATCTTCAGTCTCTTACCATTAGGCTTGAGGAAATGAGAGTGAAAAGGCGTGATTCAGAACAGTGGATGCATCATCGCTTGCTCCCACAAGATCTTAGAGAGCGTGTGAGACGTTATGATCAATATAAGTGGTTGGCAACACGTGGTGTAGATGAAGAAAACTTGGTTCAGAGTCTACCAAAGGATCTGCGAAGAGATATTAAGCGACATCTTTGTCTAGCTTTAGTGAGGAGGGTTCCTCTATTTGAGAGTATGGATGAGAGATTGCTTGATGCCATATGTGAGAGACTGAAACCATGTTTATTTACAGAGAATACATACATTGTCCGCGAAGGAGATCCAGTTGATGAGATGCTTTTCATTATACGAGGTCGCCTTGAGAGTGTCACCACAGATGGTGGGAGAAGTGGATTTTTCAACCGTGGTTTTCTAAAAGAGGCTGACTTCTGTGGTGAGGAACTCTTGACCTGGGCACTGGATCCCAGATCTGGCTCTAATCTCCCATCTTCTACTAGAACAGTTAAGGCATTGACTGAGGTAGAAGCTTTTGCCTTAACTGCTGATGAGTTAAAGTTTGTAGCCAGTCAGTTTAGGCGCCTTCACAGTAGACAGGTGCAGCACACTTTCCGTTTTTACTCCCAACAATGGAGGACTTGGGCTGCGTGCTTTATTCAAGCAGCGTGGCGCCGATATTCTAAAAAGAAACTTATGAAGCTTCGCCAGAAGGAAGAAGATCCCGATGAGTCAGAAGGAACTCAAAACAATGCTGGTGGCACTTCATACAGCCTCGGTGCTGCCTTGTTAGCCTCAAAATTTGCTGCGCACACTCTTCGAGGCGTACAACGCAATCGAAATGCCAGGACTGCCAGGGAGTTGGTGAAACTACAGAAACCACCAGAACCTGATTTTACAGCAGATGATGCAGACTAA 2172 0.4277 MGSQQDKLYRLEVFDSRLSSSTDAGVKKSGFSIDKLSNSGHGSCTTSRSFKRGMRKGSEGLKSIGRSLGFGVSKAVFPEDLKVSEKKIFDPQDKFLLLWNKLSVISCILAVSVDPLFFYLPVIDDQAHCVGIDRKLAVIATTLRTVIDAFYLIHMALQFRTAYIAPSSRVFGRGELVIDPAQIAKRYLQRYFIIDFLSVFPLPQIVVWRFLLRSNGSDVLPTKQALLYIVLFQYVPRFFRMVPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAIERNDFCWQKACRNDCNKNFLYCGNQNMVGYAAWKNISDSTLKLKCAADGDNPPFDYGIFNQALTSDIVSSSKNFFSKYCYCLWWGLQNLSTLGQGLQTSTYPGEVIFSIALAIAGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQDLRERVRRYDQYKWLATRGVDEENLVQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRGFLKEADFCGEELLTWALDPRSGSNLPSSTRTVKALTEVEAFALTADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKKKLMKLRQKEEDPDESEGTQNNAGGTSYSLGAALLASKFAAHTLRGVQRNRNARTARELVKLQKPPEPDFTADDAD 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02282 723 MobiDBLite consensus disorder prediction 698 723 - -
Adu01g02282 723 Gene3D - 104 420 - -
Adu01g02282 723 PANTHER NUCLEOTIDE-GATED ION CHANNEL, PUTATIVE-RELATED 9 720 - -
Adu01g02282 723 Pfam Ion transport protein 98 421 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Adu01g02282 723 CDD CAP_ED 495 626 IPR000595 -
Adu01g02282 723 ProSiteProfiles IQ motif profile. 631 660 IPR000048 GO:0005515
Adu01g02282 723 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 9 720 - -
Adu01g02282 723 SMART cnmp_10 495 626 IPR000595 -
Adu01g02282 723 Gene3D Helix hairpin bin 423 486 - -
Adu01g02282 723 ProSiteProfiles cAMP/cGMP binding motif profile. 495 579 IPR000595 -
Adu01g02282 723 Pfam Cyclic nucleotide-binding domain 516 606 IPR000595 -
Adu01g02282 723 SUPERFAMILY cAMP-binding domain-like 424 615 IPR018490 -
Adu01g02282 723 SUPERFAMILY Voltage-gated potassium channels 90 417 - -
Adu01g02282 723 MobiDBLite consensus disorder prediction 693 723 - -
Adu01g02282 723 Gene3D Jelly Rolls 493 613 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02282 Adu-Chr1 90291633 90296671 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02282 1 721 Ion Channels AT2G23980 76.126 0.0 1137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02282 K05391 - gmx:100784309 1239.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02282 01 90291633 90296671 Adu01g02282 01 90291633 90296671 ECH