Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02277 ATGATGAGGATGGCAATGTTGTTCTATATGATGGTGTTTGCAACAATATGTTCATCATCATCATCCATGGCAATAACAAGAGAGCAAGAAGAAGATAGAATAAGAGAGCTTCCGGGTCAGCCACGTGTCAGATTCTCACAGTTCTCAGGATATGTAAGTGTAAACAAGAAACATGGTAGAGCACTCTTCTACTGGCTCACTCAGTCTCCCTCTTCTCCCAACAACAAACCTCTTCTTCTCTGGCTCAATGGAGGACCTGGTTGCTCATCAGTAGCATATGGGGCATCAGAGGAAATTGGACCATTCAGGATAAACAAAACTGGTTCTTCTTTATATCTTAACAGATATGCTTGGAACAAAGAAGCAAATATTCTGTTTCTTGAATCACCTGCTGGTGTTGGTTTTTCTTACACAAATATCAGCTCTGATCTCCTAACTTCTGGGGACAAAAGAACAGCTCAGGATGCACTGATTTTTCTAGTTAAATGGATGTCAAGATTCCCACAGTATAAATATAGGGACTTTTACATTGCTGGGGAGAGTTATGCAGGTCATTATGTGCCTCAGTTGGCTAAGAAAATCTATGATTATAATAAAGAACATCCCAACATTATTAATCTCAAAGGGTTCATTGTGGGAAATGCTGTGACTGATAACTACCATGATAGCATTGGAACTGTGACATATTGGTGGAGCCATTCAATGATATCAGATCATTCATACAAATCTATCATCAAACATTGTGATTTCAAAGCACAGAACACTTCTCAAGAATGCAATGATGCTGTGAACTATGCAGTCAACAATGAATTTGGAAACATTGATCAATACAGTATCTATACTCCTACATGCCCAGCATCACAAAACAGCACTCTTAGGCGCATAAGGCTAAAGACTACAATGTTTCATATGATTTCTGGCTATGACCCTTGTACTGAAAATTATGCAGAGAAATATTATAATCTTCCTCAAGTGCAGAAAGCAATGCATGCAAATGTTACCAACATTCCTTACAAATGGACTGCTTGCAGTGATGTGCTCCTGAAAAATTGGAAGGACTCTGAATTTTCTATATTGCCCATATACAAAGAGTTAATTGCAGCTGGATTGAGAATATGGGTTTTCAGCGGGGACACAGATTCAGTGGTTCCAGTTACAGCCACAAGGTTTTCACTCAACCATCTCAACCTCACCATTAAAACTCCTTGGTATCCATGGTACTCATCAGGTGGACAGGTAGGTGGATGGACAGAGGTATATGATGGACTGACATTTGCAACAGTGAGAGGAGCTGGACATGAAGTACCACTGTTTCAGCCAGAGAGAGCTCACATTCTTTTCAAGTCATTTTTGGCAGGGAAGAAGCTACCAAAGTCTTGA 1380 0.3993 MMRMAMLFYMMVFATICSSSSSMAITREQEEDRIRELPGQPRVRFSQFSGYVSVNKKHGRALFYWLTQSPSSPNNKPLLLWLNGGPGCSSVAYGASEEIGPFRINKTGSSLYLNRYAWNKEANILFLESPAGVGFSYTNISSDLLTSGDKRTAQDALIFLVKWMSRFPQYKYRDFYIAGESYAGHYVPQLAKKIYDYNKEHPNIINLKGFIVGNAVTDNYHDSIGTVTYWWSHSMISDHSYKSIIKHCDFKAQNTSQECNDAVNYAVNNEFGNIDQYSIYTPTCPASQNSTLRRIRLKTTMFHMISGYDPCTENYAEKYYNLPQVQKAMHANVTNIPYKWTACSDVLLKNWKDSEFSILPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNHLNLTIKTPWYPWYSSGGQVGGWTEVYDGLTFATVRGAGHEVPLFQPERAHILFKSFLAGKKLPKS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02277 459 ProSitePatterns Serine carboxypeptidases, histidine active site. 423 440 IPR033124 GO:0004185
Adu01g02277 459 Gene3D - 358 453 - -
Adu01g02277 459 Gene3D - 311 348 - -
Adu01g02277 459 Pfam Serine carboxypeptidase 39 452 IPR001563 GO:0004185|GO:0006508
Adu01g02277 459 PANTHER SERINE CARBOXYPEPTIDASE 24 11 458 - -
Adu01g02277 459 Gene3D alpha/beta hydrolase 28 286 IPR029058 -
Adu01g02277 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 458 IPR001563 GO:0004185|GO:0006508
Adu01g02277 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Adu01g02277 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Adu01g02277 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Adu01g02277 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 423 436 IPR001563 GO:0004185|GO:0006508
Adu01g02277 459 SUPERFAMILY alpha/beta-Hydrolases 29 456 IPR029058 -
Adu01g02277 459 ProSitePatterns Serine carboxypeptidases, serine active site. 177 184 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02277 Adu-Chr1 90255471 90259489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02277 302 456 Calmodulin-binding Proteins AT2G22960 28.846 1.66e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02277 K16297 - gmx:100783242 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02277 01 90255471 90259489 Adu01g02277 01 90255471 90259489 ECH