Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02274 ATGGACTTCAACCACCGAGCTATTGGGGTTACGCCGCCGCCGCCGCCGCCGCCAACGACGCAGTCTTTATACACGGCCTTCCCTCCTCCCCCTCCTTCTCCGGCCATTGCCGTCTACTCCGACCGATTGTTGCGAGGTGAGTTTCTAAACATGGTTTCAATGCCGCTGACCAATGCGGTTGCCGGAGACTCCATGCGGGAACTGGAGAAGGCGCAGATACGGCGAGAAATGATTGCCAGCGGCGTTGCACGGAGGATTCAGCTTGAAGCTGAGGTGAGGAGGGAGCTCGCCTTGGAAGCATTGTTGGGAATTCTTCCAATGCAGAGAGGAAATCTGAGTGAATCAGTGCAGCTGCGGCCACCACCACCGCCCCCGCCACCGCCACCGCGTCGATCCTTGGTTGAGGAGAGAGTGGCAATGAGTTTGAATAACCCTTTTAATAGTACATTTGCCCCACCAAAATCACAACAGTTGCAGCAACTAATGGCTCCTGTGAAGATAGAGCCTTGTCTTGAAGAGACTAGCAAGAAGGATAAAGTGATCATACTGGGCAAGCCAAACCCAGCTCTCCATTCCGGAAAGCAGAAAGCTGTAATACCCCGGCTTGATGAGCATCGTAAACCCAAGGAAGTGTGGAGTTGTGCGCTATGTCAGGTTAGTGCTCCAAATCAGGGAGTCTTTAGTGCACATCTTCAGGGTAGGAAGCACAAGGCCAAGGAAGCATCACTGAGACAACAGAACAATAGTAAGAGCACCGACACGTCAGCGTCGTCAAAGAGAAGAAAGTCTAATGAGTTTACTGCCTCCATTGCTGCCACAATATCAAGGTCAAACGCAGAAGCAGATCAGCAGGTGAAGAATCTAAATATGGTTGATACAGCTAGAGTAGAATCTAAAAAAGAGGAGCAGCCTGAGCAGAACAGGCAAAATATAGAATCTCTGAAGAATAAGAATGGTACAACAACCACCATTGGTGATCAAGCGGAGAGAAGAAATGCATTAAAGAAAATACACGCGAAATTTTGGTGTGAAACGTGTCAGGTTGGAGTTTGGGCAGAAGCTGTGATGGAAGACCACTTGAAAGGGAAAAAGCACCTGAACCAAATGAAGAAACTTGGCACAAACCATTCGAGTTCCGCATCTTCCGACATCACAAGAAGCTCCTGTCAATTTGATCAAAGATTACAACAGAATAGCCAAAGTTCACAGTTTGTTCAGTGA 1221 0.4881 MDFNHRAIGVTPPPPPPPTTQSLYTAFPPPPPSPAIAVYSDRLLRGEFLNMVSMPLTNAVAGDSMRELEKAQIRREMIASGVARRIQLEAEVRRELALEALLGILPMQRGNLSESVQLRPPPPPPPPPPRRSLVEERVAMSLNNPFNSTFAPPKSQQLQQLMAPVKIEPCLEETSKKDKVIILGKPNPALHSGKQKAVIPRLDEHRKPKEVWSCALCQVSAPNQGVFSAHLQGRKHKAKEASLRQQNNSKSTDTSASSKRRKSNEFTASIAATISRSNAEADQQVKNLNMVDTARVESKKEEQPEQNRQNIESLKNKNGTTTTIGDQAERRNALKKIHAKFWCETCQVGVWAEAVMEDHLKGKKHLNQMKKLGTNHSSSASSDITRSSCQFDQRLQQNSQSSQFVQ 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02274 406 MobiDBLite consensus disorder prediction 294 308 - -
Adu01g02274 406 SUPERFAMILY beta-beta-alpha zinc fingers 184 247 IPR036236 -
Adu01g02274 406 MobiDBLite consensus disorder prediction 294 327 - -
Adu01g02274 406 Gene3D Classic Zinc Finger 203 250 - -
Adu01g02274 406 PANTHER OS06G0651300 PROTEIN 1 386 - -
Adu01g02274 406 MobiDBLite consensus disorder prediction 309 327 - -
Adu01g02274 406 PANTHER OS06G0651300 PROTEIN-RELATED 1 386 - -
Adu01g02274 406 Pfam Zinc-finger of C2H2 type 341 365 - -
Adu01g02274 406 Pfam Zinc-finger of C2H2 type 212 236 - -
Adu01g02274 406 SMART ZnF_U1_5 209 243 IPR003604 GO:0003676|GO:0008270
Adu01g02274 406 SMART ZnF_U1_5 338 372 IPR003604 GO:0003676|GO:0008270
Adu01g02274 406 MobiDBLite consensus disorder prediction 231 264 - -
Adu01g02274 406 MobiDBLite consensus disorder prediction 371 406 - -
Adu01g02274 406 SUPERFAMILY beta-beta-alpha zinc fingers 326 372 IPR036236 -
Adu01g02274 406 MobiDBLite consensus disorder prediction 1 21 - -
Adu01g02274 406 Gene3D Classic Zinc Finger 323 372 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02274 171 370 C2H2 Transcription Factor Family AT5G61190 26.923 1.08e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02274 - - adu:107459277 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02274 01 90239188 90241353 Adu01g02274 01 90239188 90241353 ECH