Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02232 ATGGAGAATGATGGCAAAGAGTCATATAAGGATGGTGATCAATCGAAGGATTTAAGTGTTGAGTATGAGTGCAGTTCCGATGAAAGTAATGATATGATGGATGTAACTGTAGATGAAGCAGAGACAGATATAATTAATATTGATGGTTTTAAAAAGTTGATAACTGATTTGACCATCGAAGACATACGGGGACTGATGTTTGATACAAAATCTCAAGTTTGTGAATTTTATGCCAAATATGCCCAGTGCTATGGATTTGTGTCACGAAAAGACTTGAAGACGGTGGATGCTAATGGCAACATTAATACAAGACAATTGGTTTGCAATAAATTAGGAGAAAGACATTGGAAGCACCTTAAAAAGGATAATCGGCAAAGGGAGCGTAGGGCAATTACTCGTGTCAACTGCAGGGCGAGAATTCGTTTCATTAGTCACTATAGAACGAAGAGATGGAGCGAGATCATATCCAAATATGAACTTGCCGAGAATGAATGGGTCCAAGGCATTTATAATGACAAAATGAAGTGGGATACCGCATATTTGAGGGAGCACTTCTTTGGTCACATAAGAACTACATCACAGTGTGAGGAAATTCATTCATTATTGAAGAACTATGTTGACAGTAAAACCAGTCTCCTTGAATTCATGCATAAATTTAGTGAAGTACTAAGGCATTACCGAAACAACCATCTTACTGTTGACTTTGAAACCTTTTATAAGTTTCCCGTTTTGACTACGTGTTTGAAAAATTTTGAGAAACAAGCTGCTGAACTTTATACTAGAAATATTTTCAAACTTGTGAAAGATGAGATAGAAGCAGCAGGTGCCTTAAATGTGACTGAATACCCAAATAGTGGAGACATTGTTGAGTACAACACGAACTCCGCTGATGATATAGTGCCTACACTTAGATGCGGTGCAATGACATCAATTTGTTGGAAGCTTTGTCATATTTCTTCAAAAAATTCAGCCGACTCTAGAAAAATCTCAGGTGATTCAGCTGTTGTGAAGTCAAAAGGGGCTCCAAGAAAGGCTCCAAAAGGCCAAAAGAGGCGAAGATGTTCACATTGTAAGTCAAGCAGGCATCTCATCAAGACATGTCCATTACTCCTCAAGGGGGACTCACTCGTCGAATACTCAAATGCTGAAGATGAACCAATGGTATTAATATAA 1173 0.3811 MENDGKESYKDGDQSKDLSVEYECSSDESNDMMDVTVDEAETDIINIDGFKKLITDLTIEDIRGLMFDTKSQVCEFYAKYAQCYGFVSRKDLKTVDANGNINTRQLVCNKLGERHWKHLKKDNRQRERRAITRVNCRARIRFISHYRTKRWSEIISKYELAENEWVQGIYNDKMKWDTAYLREHFFGHIRTTSQCEEIHSLLKNYVDSKTSLLEFMHKFSEVLRHYRNNHLTVDFETFYKFPVLTTCLKNFEKQAAELYTRNIFKLVKDEIEAAGALNVTEYPNSGDIVEYNTNSADDIVPTLRCGAMTSICWKLCHISSKNSADSRKISGDSAVVKSKGAPRKAPKGQKRRRCSHCKSSRHLIKTCPLLLKGDSLVEYSNAEDEPMVLI 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02232 390 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 149 274 - -
Adu01g02232 390 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 28 141 IPR031052 GO:0006355
Adu01g02232 390 MobiDBLite consensus disorder prediction 323 353 - -
Adu01g02232 390 Pfam FAR1 DNA-binding domain 75 151 IPR004330 -
Adu01g02232 390 MobiDBLite consensus disorder prediction 1 23 - -
Adu01g02232 390 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 149 274 IPR031052 GO:0006355
Adu01g02232 390 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 28 141 - -
Adu01g02232 390 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02232 Adu-Chr1 89898405 89900668 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu01g02232 FAR1 1.5e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02232 - - aip:107615270 385.571