Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02208 ATGGCTAATAACAAGAGCTTGTCATACCTTGTGGCATGGTGGCTTGTCATAATGTTTTTGGTTGCGCCAAGTATATCATCCATGGAAGAAACAGTGAAACTGCGAGTAGGGGTGCCCAAGAAAGAAGGCTTCCCGGAATTTGTGAACGTAATATGGGACGAAGATGAACACAAGTACAATGTCAGTGGATATTGCATGGATGTTTTCAATGCCGTATTAACCTTCTTACCTTTCAAAGTTTCACTACAAATTGAAGCTTACGACGTTAATGAATCAGGACAGAGCAGCACTGGAACATACGATGCACTTGTACAACAAATCCCCCAAAAGTATGATGTTGTGGTAGGGGATATCACAATACTAGCGAATCGTTCGAAGTTTGTTGATTTCACGTTGCCATATACAGAATCAGGAGTTCAAATGGTTGTAGCAGCTCGGCAGGGAAGGGAGCAAAGCATGTGGACTTTTGTGAAACCCTTCAGCTGGGATCTTTGGTTAAGCATAGTTGTCATCTCTATGTTCATAGGTTCTGTCATACTCATCATGGAAAGGAACAAGCAGGTAGCCAATTCGCAACAACTAAGCCCAATCTACTTCTTATGGTTTCCAATTTCTCAAGCCGTTCTTCCTGAAAGAGAGGGAGTAGTGAAGAAGTGCTCGAGGTTTGTGTTGATGGTGTGGCTTCTGTTGGCGTTTGTGCTGATGCAAAGCTACACGGCGAGCTTGACGACCATGATGACGGTGGAGCAGCTTCAACCGAGTTTTCTGAACGTGGATGATCTACGCACAGGGGATTACTATGTTGGATACCAAACTGGATCATTCGTTTATGATCTCTTGCTACACAAGTGGAAATTCAACCCTTCCAAGCTCAGGGCTTATGGCAGCGTTTCTCAATATCACCAAGCTTTGAAGATTGGAAGCCGTGGCGGTGGCGTTTCCGCTATAGTCGATGAACTTCCCTACCTTAAACTCTTCCTTCAAAAATATGGATCTAATTACATGATCGCTGGTCCAACCTATCGAACTGCTGGCTTTGGTTTTGCATTTGCAAGAAACTCTAATCTTACAGCTGCGTTTTCAAGAGGGATTCTGGAAGTGACTGAGAGTGACGAAATGGATAAGATCGAGGCAAAATATTTTGGCAAGATTATGAATAATGGATGGCAAGACCAAGCTGATGCTTCAACAACAACGTCCTCGTCGTCTTCTCCGAGCAGTCTCACGTTTTATAGCTTTTCAGGGCTGTTCCTCGTAACAGGAAGTGCAACTTTGTTGGCATTATTTGTCTCCGAGACAGTGATTTGGCGAACACCAATTTCCATGGCCAAAGCATATAGTCGCAAATATTTGTTCCGCACTACTAGTTCTACTTCTACGCAAACTCATCCAACAACCGATGATGATTCTTCATCACATACAACGGAATCCGTTTAA 1437 0.4349 MANNKSLSYLVAWWLVIMFLVAPSISSMEETVKLRVGVPKKEGFPEFVNVIWDEDEHKYNVSGYCMDVFNAVLTFLPFKVSLQIEAYDVNESGQSSTGTYDALVQQIPQKYDVVVGDITILANRSKFVDFTLPYTESGVQMVVAARQGREQSMWTFVKPFSWDLWLSIVVISMFIGSVILIMERNKQVANSQQLSPIYFLWFPISQAVLPEREGVVKKCSRFVLMVWLLLAFVLMQSYTASLTTMMTVEQLQPSFLNVDDLRTGDYYVGYQTGSFVYDLLLHKWKFNPSKLRAYGSVSQYHQALKIGSRGGGVSAIVDELPYLKLFLQKYGSNYMIAGPTYRTAGFGFAFARNSNLTAAFSRGILEVTESDEMDKIEAKYFGKIMNNGWQDQADASTTTSSSSSPSSLTFYSFSGLFLVTGSATLLALFVSETVIWRTPISMAKAYSRKYLFRTTSSTSTQTHPTTDDDSSSHTTESV 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02208 478 Gene3D - 27 153 - -
Adu01g02208 478 CDD GluR_Plant 33 381 - -
Adu01g02208 478 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 5 471 - -
Adu01g02208 478 Gene3D - 345 381 - -
Adu01g02208 478 Gene3D - 154 283 - -
Adu01g02208 478 Pfam Ligand-gated ion channel 384 422 IPR001320 GO:0015276|GO:0016020
Adu01g02208 478 SMART GluR_14 33 383 IPR001320 GO:0015276|GO:0016020
Adu01g02208 478 Pfam Bacterial extracellular solute-binding proteins, family 3 61 383 IPR001638 -
Adu01g02208 478 MobiDBLite consensus disorder prediction 457 478 - -
Adu01g02208 478 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 5 471 - -
Adu01g02208 478 SUPERFAMILY Periplasmic binding protein-like II 7 383 - -
Adu01g02208 478 Gene3D - 314 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02208 Adu-Chr1 89529328 89531400 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02208 33 463 Ion Channels AT2G29110 40.397 1.99e-84 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02208 K05387 - gmx:100811144 550.436