Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02205 ATGGGATCCTCCCTGAGTTGCTGTGGCTCTGACAAAATTGAAGAAGCAGCGCAAACAGCATTTGGTGCAGTTAACAACAATTCATGGAGAATATTCACGTACAAGGAGCTGCATGCAGCTACGAATGGATTCAGTGAGGACAATAAGCTTGGTGAAGGTGGATTTGGAAGCGTGTATTGGGGAAAAACAAGTGATGGTCATGAGATAGCGGTGAAGAAACTGAAGGCAATGAACTCGAAGGCAGAGATGGAATTTGCGGTAGAAGTAGAAGTACTGGGAAGGGTTAGGCACAAGAATTTGTTGGGACTGAGAGGGTACTGTGCAGGGAATGAAGAAAGGCTTATAGTGTACGATTACATGGCGAATCTAAGCCTTCTTTCTCATCTGCATGGGCAGTTTGCAAATGAAGTGCAACTGGATTGGAAAAGGAGAATGAAGATTGCAATTGGATCTGCAGAAGGAGTGTTGTATTTGCACCATGACGTCACACCACACATCATCCACAGAGACATCAAAGCAAGCAACGTTCTTCTCAACTCAGACTTCGAGCCGCTTGTTGCTGACTTCGGCTTCGCTAAGCTGATCCCTGAAGGGGTTAGCCACATGACTACCCGTGTTAAGGGCACTTTGGGATACTTGGCACCCGAATACGCCATGTGGGGAAAAGTCTCCGAGAGTTGCGATGTTTATAGCTTTGGGATTCTTCTCTTGGAGCTTGTAACTGGAAGAAAGCCAATTGAGAAGCTCCCTGGTGGGATTAAGAGAACCATAACCGAATGGGCTGAGCCATTCATAAGTAAATCAAGGTTCGGGGATCTTGTTGATCCTAAACTCAGAGGTAACTTTGATGAGAATCAGGTGAAGCAAGCCATTCATGTGGCTGCACTTTGCGTGCAGAGTGAGCCTGATAAGAGACCCAACATGAAGCAAGTGGTTAACCTTCTCAAAGGGTATGAACCCAATCATAACACTGTTTTCAACACTAGGCTTCACACTGTCAAATACACTGATACATTGATGCCACTTGATCATCATGGTGATGATGATCTTGATGATGATGCAACTAATAGCAGCGCCGGCTATGGTGTTTTTAGTGCCATTCAGGTCCAAAAGATGAACTTACCACCATAA 1131 0.4518 MGSSLSCCGSDKIEEAAQTAFGAVNNNSWRIFTYKELHAATNGFSEDNKLGEGGFGSVYWGKTSDGHEIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGNEERLIVYDYMANLSLLSHLHGQFANEVQLDWKRRMKIAIGSAEGVLYLHHDVTPHIIHRDIKASNVLLNSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVTGRKPIEKLPGGIKRTITEWAEPFISKSRFGDLVDPKLRGNFDENQVKQAIHVAALCVQSEPDKRPNMKQVVNLLKGYEPNHNTVFNTRLHTVKYTDTLMPLDHHGDDDLDDDATNSSAGYGVFSAIQVQKMNLPP 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02205 376 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Adu01g02205 376 PANTHER OS01G0750732 PROTEIN 1 373 - -
Adu01g02205 376 CDD STKc_IRAK 50 317 - -
Adu01g02205 376 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 1 373 - -
Adu01g02205 376 Pfam Protein kinase domain 45 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g02205 376 ProSiteProfiles Protein kinase domain profile. 44 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g02205 376 SMART serkin_6 44 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g02205 376 SUPERFAMILY Protein kinase-like (PK-like) 28 326 IPR011009 -
Adu01g02205 376 Gene3D Transferase(Phosphotransferase) domain 1 120 337 - -
Adu01g02205 376 Gene3D Phosphorylase Kinase; domain 1 14 119 - -
Adu01g02205 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02205 Adu-Chr1 89487623 89489157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02205 6 334 Trihelix Transcription Factor Family AT5G38560 44.928 6.13e-95 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Adu01g02205 Pkinase 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02205 - - ahf:112698754 741.88