Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02191 ATGGGAAGAGCACCATGTTGTGACAAGGCCAACGTGAAGAAAGGACCTTGGTCCCCTGAAGAAGATGCTGCTCTCAAAGCCTACATAGAAAAGAATGGAACTGGAGGCAATTGGATTGCTCTTCCTCAGAAAATTGGGCTGAAGAGATGTGGAAAGAGTTGCAGGCTTAGATGGTTAAACTATTTAAGACCTAACATCAAGCATGGTGGATTTACTGAAGAAGAAGACAACATCATCTGCAGCCTTTACATTAGCATTGGAAGCAGGTGGTCCATTATTGCGGCACAGCTACCTGGAAGGACAGATAACGACATCAAGAACTACTGGAACACTAGATTGAAGAAGAAACTGCTCGGAAGGCGCAAACAATCCAGCTTCAACAGCTCCAAGGACTCCAATATTGGGATGCAAGATGACACATCATGTTCCAATAACAATAGTAATGCCCTAAGCACTTCAGCTCTTGAGAGGCTTCAACTTCATATGCAGCTTCAAAGCCTCCAAAACCCTTTCTCTTTCTACACCAACCCTGCCCTCTGGCCAAAGTTGCATCCTTTTCAAGAAAAGATGATTCACCACAATCTGCAGCAGCAGCAGCACCAATCTCATAATCTTAACAGTCATGACTCCAACTCCAATAACCCTTTAATGCAGAATACTAATAATGCTTTGCTTTCTCCTCATCATCATGTGCTGAATCAAGAAGAAGGGGAAAAGGATACCAAGAATTCAAAGGTTGATCTTTTGGAGAATCCGCTTAATAGTAATGGCTGTTCATCAGTTCTCTTCAATAACAGTAATCCATTATTGCACTCATCAAGTGATGCCATTATTGCACCAAGAGGAGATGGTGTTGAGGGAATTCAGCAGGTTTGTGCTATCCAAAGTGAGCTTGATGAGATTTTGAATCTCAATAGCAACAGAAGAATGTGTTACATTCCACAGGAGGAGGAAGAAGAGGAGGAGGATCAGATTCAACAGATGGCTGATGATGAGTTTGACTGTTTGAGAGAGATGAATAGTAATAATAATAACAATGGTAATTCAAAGGACAGTAATAGTAACTTGATTTGGTGGTCCAATGATTCTTCTGCTGATACCAAATCAGCATCCTCAAATTCTTGGGAGTCAATGTCATCCACTCCAGTTCTTCTGCCAGAAGGGATGTTCCAAGATTATGAACTAGGTGATGAGTCAGCCGTTAAGTGCCACATGTTCAATCAAGACAAATTGGTCCCTATTCTGAATGATGCTAAACGCGGCATTTTGGGAGCAGGGCATAAGGTCAGTCTTCCGACGACCTCGCTGACATTGTTGACTCAAGACTTTGTACCAAACGAAGTTATTGTAGAAGAAGGTTTTACCGGTCTATTGGTCTTCACCGGTCAGGTTATTCCTGTCTTTCAACATGGGGGGAGTTTTGTCAAAGATAACAAGGGTGAACTACTTTACATTAATGGGAATGTAAAGAGATTTCCTCCTTTGGATCTTGATTTAGTGAATTATTTTGATTTGAAGAAAATGTTTGAAGAACTTGGCTACCATGCATACAAAAAGATGTATTGGTATGACCCAACAGCTCCTAGTTATGAAGCAGGCCTACATCCTATATATGGAGATAAGGAAATCAGAGAGATGTGTGACAAAAAGAGGGAGGACAGAGAGACGGATGAATTGTGTCTGTTCTTTGATCATCCAATTATGGAAGATGTTGATTTTGAGGATAGCGATGATACTGATGAGCATAGTGAGGCCGAGGTCTTGTCCGATGAACCAATTTCTGACAACGATAGCTATGATAGCTATGAAAGTGCTGAAGACGAGGCGTATAAACCCCACCTCCAGGATTTGAGGATGACACCGATGATAGCTATGATAGTTTTGAAGATGAAGAACTCATGA 1902 0.4154 MGRAPCCDKANVKKGPWSPEEDAALKAYIEKNGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGRRKQSSFNSSKDSNIGMQDDTSCSNNNSNALSTSALERLQLHMQLQSLQNPFSFYTNPALWPKLHPFQEKMIHHNLQQQQHQSHNLNSHDSNSNNPLMQNTNNALLSPHHHVLNQEEGEKDTKNSKVDLLENPLNSNGCSSVLFNNSNPLLHSSSDAIIAPRGDGVEGIQQVCAIQSELDEILNLNSNRRMCYIPQEEEEEEEDQIQQMADDEFDCLREMNSNNNNNGNSKDSNSNLIWWSNDSSADTKSASSNSWESMSSTPVLLPEGMFQDYELGDESAVKCHMFNQDKLVPILNDAKRGILGAGHKVSLPTTSLTLLTQDFVPNEVIVEEGFTGLLVFTGQVIPVFQHGGSFVKDNKGELLYINGNVKRFPPLDLDLVNYFDLKKMFEELGYHAYKKMYWYDPTAPSYEAGLHPIYGDKEIREMCDKKREDRETDELCLFFDHPIMEDVDFEDSDDTDEHSEAEVLSDEPISDNDSYDSYESAEDEAYKPHLQDLRMTPMIAMIVLKMKNS 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02191 633 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Adu01g02191 633 CDD SANT 71 113 IPR001005 -
Adu01g02191 633 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Adu01g02191 633 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Adu01g02191 633 MobiDBLite consensus disorder prediction 573 610 - -
Adu01g02191 633 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Adu01g02191 633 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Adu01g02191 633 MobiDBLite consensus disorder prediction 122 147 - -
Adu01g02191 633 CDD SANT 16 62 IPR001005 -
Adu01g02191 633 Gene3D - 70 141 - -
Adu01g02191 633 MobiDBLite consensus disorder prediction 194 222 - -
Adu01g02191 633 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Adu01g02191 633 MobiDBLite consensus disorder prediction 120 147 - -
Adu01g02191 633 SMART sant 13 64 IPR001005 -
Adu01g02191 633 SMART sant 67 115 IPR001005 -
Adu01g02191 633 PANTHER OS09G0431300 PROTEIN 1 334 - -
Adu01g02191 633 PANTHER OS09G0431300 PROTEIN 1 334 - -
Adu01g02191 633 Gene3D - 7 68 - -
Adu01g02191 633 MobiDBLite consensus disorder prediction 573 603 - -
Adu01g02191 633 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02191 Adu-Chr1 89331640 89336284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02191 1 186 MYB Transcription Factor Family AT5G57620 78.075 5.87e-99 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu01g02191 Myb_DNA-binding 3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02191 K09422 - gmx:100783440 436.032