Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02181 ATGGAACCAACAAGAAACCATGATCATCATCACGGTGGTGACCATCACTTTATTTTCCGTTCCAAGCTGCCCGACATTTACATCCCAACCCACCTCCCTCTCCACACTTACTGCTTTCAGAATCTCTCCCACTTCAAGGACCGTCCTTGCCTCATCAACGCCACCACCGGCGTTACTTTCACCTACGCCGCCGTCGAACTAACCGCCAGAAAAGTCGCCGCCGGACTCAACAACCTAGGTGTTCGTCAAGGCGACGTCATCCTCCTCCTCCTCCAGAACTGCCACCAGTTTGTCTTCGCCTTCCTTGGCGCCTCCTACCGTGGTGCCATCGTCACCACCGCCAACCCCTTCTACACCCCCGCCGAGGTCGCCAAGCAGGCCACCGCCTCCGCTGCTAAGCTCATAATAACTCAGTCGTCGTTCGTGGACAAGGTAAAGGATCTGGCCAGGGACAAACACATCAAGGTCGTGTGCATCGACGCGCCGCCGCAGGGGTGCCTTGACTTCTCGGAGCTAACAGAGGCGGATGAGGGCGACATCCCTGCCGTGAAAATCTTCCCGGATGATGTAGTTGCGCTGCCGTATTCGTCCGGCACGACGGGGCTCCCAAAAGGGGTGATGCTAACACACAAAGGGTTAGTGACGAGCGTGGCTCAGCAGGTGGACGGAGAGAACCCCAATCTGTACATTCAGCACGATGATGTGGTGGTTTGCGTGCTTCCACTGTTCCACATTTACTCGCTGAATTCGGTTCTGCTGTGCGGGCTTCGAGTAGGGGCTGCAATAGTGATAATGCACAAGTTTGAGGTGGTGGGGCTGCTTCAAGTGGTTGAGAAGCACAGGGTGAGCGTTGCGCCATTAGTGCCTCCGATTGTTCTTGCGATAGTAAAGAGCCGGGAGGTGACACGCTACGACTTATCGTCCATTCGGATGGTGATGTCCGGTGCGGCCCCATTGGCAAGCAATGTTACGAAACTGCCCTCGCTCAACACAATAAGCATGATAAGATTATTAGAGCGTGTGTGCATGCAGGGTTATGGGATGACGGAAGCAGGTCCAGTGCTTTCGATGTGTTTAGCGTTTGCAAAGGAACCTTTTGAGGTGAAATCATCAGGTGCGTGCGGGACCGTCGTAAGAAACGCAGAGATGAAGATTGTGGATCCTCTCACGGCTGCTTCCCTCCCCAGAAATCATGCCGGTGAGATTTGCATCAGAGGCAACCAGATTATGAAAGGGTACCTGAATGACCGAGAGGCGACGGAGAGAACCATAGACAAAGAAGGATGGTTACACACGGGTGACATTGGTTACATTGATGATGATGATGAGCTCTTCATCGTTGATCGCTTGAAGGAGCTTATCAAATACAAAGGATACCAAGTGGCACCTGCTGAGCTGGAATCTTTGTTGATTGCCCACCCAAACATCTCTGATGCCGCTGTTGTACCGCTGAAAGATGAAGTTGCTGGAGAAGTACCAGTTGCATTTGTTGTGAGATCAAATGGTTCTAATATCACCGAGGATGAAATCAAGAAATATATTTCTAAACAGGTGGTATTTTACAAGAGAATAAACAGAGTGTTCTTCACTGAAAGTATTCCAAAAGCAGCGTCAGGTAAAATTCTGAGGAAGGTATTAACAGCAAGGCTTAACGAAGGTTTG 1662 0.5114 MEPTRNHDHHHGGDHHFIFRSKLPDIYIPTHLPLHTYCFQNLSHFKDRPCLINATTGVTFTYAAVELTARKVAAGLNNLGVRQGDVILLLLQNCHQFVFAFLGASYRGAIVTTANPFYTPAEVAKQATASAAKLIITQSSFVDKVKDLARDKHIKVVCIDAPPQGCLDFSELTEADEGDIPAVKIFPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYIQHDDVVVCVLPLFHIYSLNSVLLCGLRVGAAIVIMHKFEVVGLLQVVEKHRVSVAPLVPPIVLAIVKSREVTRYDLSSIRMVMSGAAPLASNVTKLPSLNTISMIRLLERVCMQGYGMTEAGPVLSMCLAFAKEPFEVKSSGACGTVVRNAEMKIVDPLTAASLPRNHAGEICIRGNQIMKGYLNDREATERTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGYQVAPAELESLLIAHPNISDAAVVPLKDEVAGEVPVAFVVRSNGSNITEDEIKKYISKQVVFYKRINRVFFTESIPKAASGKILRKVLTARLNEGL 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02181 554 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 14 550 - -
Adu01g02181 554 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Adu01g02181 554 SUPERFAMILY Acetyl-CoA synthetase-like 15 552 - -
Adu01g02181 554 Pfam AMP-binding enzyme C-terminal domain 465 540 IPR025110 -
Adu01g02181 554 CDD 4CL 28 546 - -
Adu01g02181 554 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 14 550 - -
Adu01g02181 554 Gene3D - 451 552 IPR045851 -
Adu01g02181 554 Gene3D - 10 450 IPR042099 -
Adu01g02181 554 Pfam AMP-binding enzyme 41 456 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02181 Adu-Chr1 89162799 89186549 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02181 9 518 Monolignol Biosynthesis Gene Families AT1G51680 65.318 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02181 K01904 - gmx:100779668 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02181 01 89162799 89186549 Adu01g02181 01 89162799 89186549 ECH