Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02173 ATGGATACTGGAGAGGAGTACTCACTTGTTATTGAACTATCTGAAAACGATCTTTTCTTTGAACAAAAGAAGAAATTACTAGAAAATAAGGGTTTTCGACCCAAGGAACGAATATACCTCAAGGGTACCTCAAAGCCTGGTTGGGTGAATGCTACCGTAAAGGTTTTACTGCAGATTGCGCGAATTATACAGTTAAATGAGCTGGAACTTTATTTTGCCGAAGATGATGGATGTCCTTTAGTGGAGTTTTACAGCCCCAGGAATGAGTTAGAGGCTTTCGATTCAATTCTTTCACTTGTTGACATATCACTTTCTTCTTGTGCAAATCTCCATACAAATATCCTGGAATTGTTACGACAAACAATTCTTGATTTGATTTCTGATTTTGGGGATAAGAATAGTGTGAAGGGAATAGTTGAAAGAGACCATGGTATTGACCAGGAAGAACGCCTGATAAAATGGGCAGAAAGCAATGGTGTAAGGACACAGCTAAAAATTGCTTATGTCCAAGGTGCAGGACGTGGTGCAATAGCGAGGGAGGATCTCAAAGTTGGAGACATTGCTTTAGAAATTCCTAGTTCCATTATCATTTCCGAGGAGCTTGTTTGTGAAACTGATATGTATCATGTCTTAAAAGAGGTTGATGGCATATCTTCAGAGACAATATTGCTGCTGTGGAGTATGAAAGAGAAGTACAACGTCAATTCAAAATTCAAAATATACTTTGACACACTCCCGGAAAAATTCAATACAGGATTGAGTTTTGGCATTGAAGCAATTACAATGTTAGATGGAACCTTGCTGTTGGAAGAGATAATGCAAGCAAGACAGCACCTGCATGCTCAGTATGACGAGTTGTTCCCTGCTTTGTGTAACAACTTCCCTGAGATATTTCCAGTAGAGCTGTATACATGGGAGAAATTTTTATGGGCTTGTGAACTTTTTTACTCCAATAGCATGAAGATAATGTTCCCTGATGGAAAGCTGACGACATGCTTGATCCCTATAGCTGGCTTTCTTAATCATTCACTGTGCCCACATATTTTGCACTATGGCAAAGTAGATGCTACTACAAATTCATTGAAATTTCGTCTATCAAGACCATGCAAATCTGGAGAAGAATGCTGCTTAAGCTATGGGAACTTCTCCAGTTCTCATCTAATTACCTTCTATGGTTTCTTACCGCGAGGAGACAACCCATATGATACCATTCCATTAGATATTGATGGTTCTGATGTTGATTATGTTGAGGATAAATGCCCGCCCAACTGGACGACTCACATGGTGCGTGGTACTTGGCTCTCCAACAATCACAGCCTATTCTATTATGGCCTTCCCTCTCCATTATTGGACCATCTTCGGAGATCTCGAAGTCCCATGCTGAATACGAAGACCTTGTTGCAAGGAAACTTGGAAAATGAGCTGCAAATTCTTGAAGATCTAATATATATATTTGATGACATGATTGACAACATGGGTGAGAGCGATTTTGATGACAGAGAAAACTGCAGCTGGGATGGAAAATTGGCAATGGATTTTAAGAATCTACAAAGACGAATTGCGTGTTCTGTTTCAAGCTCATGTCATAATGGTGTCAACATGTTGACGAATGAATTAAACAAGTGCATGGCTGAGGACACACGAGGCTAA 1650 0.3976 MDTGEEYSLVIELSENDLFFEQKKKLLENKGFRPKERIYLKGTSKPGWVNATVKVLLQIARIIQLNELELYFAEDDGCPLVEFYSPRNELEAFDSILSLVDISLSSCANLHTNILELLRQTILDLISDFGDKNSVKGIVERDHGIDQEERLIKWAESNGVRTQLKIAYVQGAGRGAIAREDLKVGDIALEIPSSIIISEELVCETDMYHVLKEVDGISSETILLLWSMKEKYNVNSKFKIYFDTLPEKFNTGLSFGIEAITMLDGTLLLEEIMQARQHLHAQYDELFPALCNNFPEIFPVELYTWEKFLWACELFYSNSMKIMFPDGKLTTCLIPIAGFLNHSLCPHILHYGKVDATTNSLKFRLSRPCKSGEECCLSYGNFSSSHLITFYGFLPRGDNPYDTIPLDIDGSDVDYVEDKCPPNWTTHMVRGTWLSNNHSLFYYGLPSPLLDHLRRSRSPMLNTKTLLQGNLENELQILEDLIYIFDDMIDNMGESDFDDRENCSWDGKLAMDFKNLQRRIACSVSSSCHNGVNMLTNELNKCMAEDTRG 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02173 549 PANTHER BNAA07G01600D PROTEIN 10 545 - -
Adu01g02173 549 CDD SET_LSMT 164 394 - -
Adu01g02173 549 Pfam SET domain 173 380 IPR001214 GO:0005515
Adu01g02173 549 Gene3D - 3 126 IPR036464 -
Adu01g02173 549 Gene3D set domain protein methyltransferase, domain 1 146 394 - -
Adu01g02173 549 ProSiteProfiles SET domain profile. 162 380 IPR001214 GO:0005515
Adu01g02173 549 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 10 545 - -
Adu01g02173 549 SUPERFAMILY SET domain 147 401 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Adu01g02173 SET 3.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02173 K19199 - gmx:100778605 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02173 01 89073294 89079069 Adu01g02173 01 89073294 89079069 ECH