Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02157 ATGGACTCTTCCTCTTCTTCATCCCTTCCTTTCTCTCTCTCCAACCACTCTTCTTCCTCTCCTCTCTCCCTCTTCCACCCCTCCTTCACCGACGCCGCCGATGCCCGATCAACTAACCTCTCCATATTCACCGGGGTCCCCNNNNNNNNNNNNGAGGACTTCCTCGGTGCCTCCGCCGCAACTGCACCCACCGCCACAACACCATCTGCACCACCGCCCCCGCCGCCGCCGCCGCAGCTTGCTCAGTTCTCCACCGACAACAACAACGGCGTGATATATGACTCTGAACTGAAGACAACGATAACCGCCTGCTTCCCTGGCGGTTTCGGCGGCGGAGCTTCAAATGGCGCTGAACTGAGTCAGAAGCCATCTCCAAAGAAAACTGTGGACACCTTCGGCCAACGCACCTCCATCTACCGCGGAGTCACAAGACATAGATGGACAGGGAGATATGAAGCTCATCTATGGGATAACAGCTGCAGAAGGGAAGGACAAAGTAGGAAAGGAAGACAAGTTTATTTGGGTGGCTATGACAAGGAAGAGAAAGCGGCCAGAGCTTATGATCTCGCTGCTCTCAAGTACTGGGGTCCAACCACTACCACCAACTTTCCGGTTTCCAACTATGAGAGGGAGCTAGAGGAAATGAAGAACATGACAAGACAAGAGTTTGTTGCTTCTCTAAGAAGGAAGAGCAGTGGATTCTCTAGGGGGGCGTCTATATACAGAGGAGTGACTAGGCACCACCAGCATGGGCGATGGCAGGCAAGAATAGGCAGAGTAGCCGGAAACAAAGACCTGTACCTTGGCACTTTCAGTACCCAAGAAGAAGCTGCAGAGGCTTATGACATTGCAGCAATAAAATTCAGAGGACTCAACGCAGTGACCAACTTCGACATGAGTCGCTACGACGTCAAGAGCATTGCTAACAGCACCCTTCCCATCGGCGGACTATCAAACAAGAACAAGAACTCCGCCGATGACCCCGTCGTCACTCAACCACCACCACCACCACCTTCAAGCTCCACCCTCAGCTTCGCCATTCCCATCAAACAAGACCCTTCCGCAGATTACTGGTCCATCATTGGCTACTCCAATAACACACAGCTGGAAAGTGCCAGGGGTACAAATGTAATTGCAACAGCAGCAACCTCTTTTCTACCTCCCAACAACAATGGCAATGGCATGATGGAGTTCTCCGCTGCCCCTTCAGCGGACGGATTCTTGAACGGAGGAGGGATCTTTGTTAGCCACAATCATCATCAAGAAGAGAGTGGTGGTTGTTCCTCACCATCTTCGGGTGGTTCTTCAATCCCATTGGCAACGCCAATATTTTCCTTAAATAGCAACAATAATTATGAGAACTGGATTGGTCCAACACTGCACACATTCCAAGCTCATGCAAAACCCAGTCTCTTTCAAACGCCAATATTTGGAATGGAATGA 1443 0.5073 MDSSSSSSLPFSLSNHSSSSPLSLFHPSFTDAADARSTNLSIFTGVPXXXXEDFLGASAATAPTATTPSAPPPPPPPPQLAQFSTDNNNGVIYDSELKTTITACFPGGFGGGASNGAELSQKPSPKKTVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPVSNYERELEEMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANSTLPIGGLSNKNKNSADDPVVTQPPPPPPSSSTLSFAIPIKQDPSADYWSIIGYSNNTQLESARGTNVIATAATSFLPPNNNGNGMMEFSAAPSADGFLNGGGIFVSHNHHQEESGGCSSPSSGGSSIPLATPIFSLNSNNNYENWIGPTLHTFQAHAKPSLFQTPIFGME 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02157 480 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 115 329 - -
Adu01g02157 480 SUPERFAMILY DNA-binding domain 137 206 IPR016177 GO:0003677
Adu01g02157 480 ProSiteProfiles AP2/ERF domain profile. 240 298 IPR001471 GO:0003700|GO:0006355
Adu01g02157 480 MobiDBLite consensus disorder prediction 313 346 - -
Adu01g02157 480 MobiDBLite consensus disorder prediction 66 81 - -
Adu01g02157 480 Pfam AP2 domain 240 290 IPR001471 GO:0003700|GO:0006355
Adu01g02157 480 Pfam AP2 domain 138 196 IPR001471 GO:0003700|GO:0006355
Adu01g02157 480 ProSiteProfiles AP2/ERF domain profile. 138 204 IPR001471 GO:0003700|GO:0006355
Adu01g02157 480 MobiDBLite consensus disorder prediction 1 28 - -
Adu01g02157 480 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM 115 329 - -
Adu01g02157 480 MobiDBLite consensus disorder prediction 414 433 - -
Adu01g02157 480 MobiDBLite consensus disorder prediction 54 89 - -
Adu01g02157 480 Gene3D AP2/ERF domain 138 206 IPR036955 GO:0003700|GO:0006355
Adu01g02157 480 Gene3D AP2/ERF domain 240 300 IPR036955 GO:0003700|GO:0006355
Adu01g02157 480 SUPERFAMILY DNA-binding domain 239 300 IPR016177 GO:0003677
Adu01g02157 480 MobiDBLite consensus disorder prediction 313 328 - -
Adu01g02157 480 PRINTS Ethylene responsive element binding protein signature 139 150 IPR001471 GO:0003700|GO:0006355
Adu01g02157 480 PRINTS Ethylene responsive element binding protein signature 280 300 IPR001471 GO:0003700|GO:0006355
Adu01g02157 480 CDD AP2 137 206 IPR001471 GO:0003700|GO:0006355
Adu01g02157 480 SMART rav1_2 138 210 IPR001471 GO:0003700|GO:0006355
Adu01g02157 480 SMART rav1_2 240 304 IPR001471 GO:0003700|GO:0006355
Adu01g02157 480 CDD AP2 239 300 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02157 Adu-Chr1 88913218 88916564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02157 73 480 AP2-EREBP Transcription Factor Family AT5G57390 56.502 5.22e-148 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Adu01g02157 AP2 3.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02157 K09285 - gmx:100803558 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02157 01 88913218 88916564 Adu01g02157 01 88913218 88916564 ECH