Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02156 ATGGCTGCTGATTCGTCTATTGAGGGCCTGGTGCTTGATCCTTCTAAATGCAGTAAGTTGACTATGGAGGAAAAAAGAGAACTTGTATATGAATTGTCCAAGTGGTCTCATGGTGCATCCGAGATGCTACAGTCATGGAGCCGTCAAGAAATTTTGCAAATCTTGTGTGCGGAGATGGGGAAAGAAAGGAAGTATACTGGGTTGACAAAGTTGAAAATTATAGAGAACCTTCTAAAAATTGTTTCTGAAAAGAAATCTGCGGGGCATGAAACTGCCACAGACTCTGAACCACAGCAATCTTCTCCTGCAAATGGTCAGAAACCTGCCAAAAGGCAGAGAAAAACTGAGAATCCATCTCGATTGCTGGTGCCTGCAAACAATGTTCCAGTTAATAATGGTGGTGATGTGGGTAGTGTCACATGCTGCAAAAACTCAGCTTGCAAAGCTGCGCTGAATCTAGCAGATAAATTTTGCAAACGGTGTTCATGCTGCATTTGTCATCAATATGATGACAACAAGGATCCTAGCCTATGGTTAATATGCAGCTCTGAATCACCTTTTCCTGCCGTTTCTTGTGGCTTGTCATGCCACCTTGAGTGTGCTTTAAAACACGTTGCTTCTGGAATTGGCAAAGATAGTGAACGTCCCAAGCTTGATGGAAGCTTCTATTGTGTCTCTTGTGGGAAAATAAATGATTTACTCGGGTGCATGAGAAAACAACTGACAGTGGCAAAGGATACCAGACGTGTGGACATACTTTGTTACCGTGTCTCCTTATGCCAAAGACTTCTTCAAGGGACTGAAATGTATCAAAAGATTTATGAAATTGTTGATGAAGCAGTGAAGAAACTTGAACCTGACGTGGGTCCATTGACCAGCTCACCAGCAAAGATTGGTAGGGGGATTGTGAATAGGCTTTCATCTGGACCAGGGGTTCAGAAACTCTGTGGATCTGCTCTGGAATCTCTTGATTCACTGCTTTCGAATAGGATCTCGCCTATATCACCTAATCTAACTACTCAAGTTGATCAATCAACACCTAACGATGCAAAAATGCTTGCTCCAAGCATGGTGAGGTTTGAAGACATCACTGCAACATCCCTTGCTATTATTTTGGGATATGAAAATCATGGAGAAAATATTTCTGGTTTCACCTTGTGGCATCGCAAAGCTGATGATGAGGACTACGCAGTGGACCCTACTTGCACTTTGCTTCTTCCAAATAGAAGGTTCAGTGTCAGAGATCTTATTCCTGCTACAGAATACACTTTCAAAGTTGTTTCTAATGACTCGAGGGAGTTGGGCGTGTGTGAAGTTCATATCTCAACAGAGCACGGTGATGATGAAGCCCCTAATTGCTCGGCAACGGAAAGAAGCCAGAGCCCAGTAACCAACTGCAGCAGCCTTTCCAATCCATCTTCAGTGGAAGATGAAACTAATAACAGCAATCCATATAGTGACCAGACTGATAATCGGTCAGAAAATTATCATAATTATTGCAAGGATTCTGATCAAGTTGCTACTGGAAATTTATCAAATGGTACTATTATCTGTTCCAATATAGGTGGAGCAGGACTTCCCACAGATGCAGATTCCTTGTTGGACAAGCAGCATTCTGCAGGAATGGCTGGCCCCATTCCAGGTTCTGATGTACTAAAGCTTGAAAACAATCATTCACCAGAGGAACAAGTCACTGAGGACATGAGCGTTGATGACGGGTTGAATTCGCCGGTGTTAACTGGCAGAGAATGTGTGCCATTAGTAGCTAGCTCAGAAGGAGGCTTACCTAATACCCCATGCAAGTTGGAAATACTCAAGGATGGGCCAGGAAGAAATGGGAGATCTAAATCTGGTGGAAAAGATCAAGAAAATGGATCCGGGAAGAGGGAAGGGGCTCGGGACGGGAGCACCTCAAAGAAGAGAAGCGGGGAAAGGCCAGATGAGGGCTGCACAGCAAACGGGTTTTCAGATCACAATTTTGAGTATTACGTGAAGGTGATTAGATGGTTAGAGTGTGAAGGGCACATAGAGAAGAATTTCAGGCAGAAGTTTCTGACTTGGTATAGCTTAAGAGCAAGCCCACAAGAAATGAGGATTGTGAAAATATACATAGACACATTTCTTGAAGATCCAGCATCTCTTGCTGAGCAACTTGTGGACACTTTCACAGAATGCATATCTTGCAAGAGAACTTCAGTGGTGCCGGCAGGATTCTGCATGAAGCTTTGGCATTGA 2235 0.4349 MAADSSIEGLVLDPSKCSKLTMEEKRELVYELSKWSHGASEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIVSEKKSAGHETATDSEPQQSSPANGQKPAKRQRKTENPSRLLVPANNVPVNNGGDVGSVTCCKNSACKAALNLADKFCKRCSCCICHQYDDNKDPSLWLICSSESPFPAVSCGLSCHLECALKHVASGIGKDSERPKLDGSFYCVSCGKINDLLGCMRKQLTVAKDTRRVDILCYRVSLCQRLLQGTEMYQKIYEIVDEAVKKLEPDVGPLTSSPAKIGRGIVNRLSSGPGVQKLCGSALESLDSLLSNRISPISPNLTTQVDQSTPNDAKMLAPSMVRFEDITATSLAIILGYENHGENISGFTLWHRKADDEDYAVDPTCTLLLPNRRFSVRDLIPATEYTFKVVSNDSRELGVCEVHISTEHGDDEAPNCSATERSQSPVTNCSSLSNPSSVEDETNNSNPYSDQTDNRSENYHNYCKDSDQVATGNLSNGTIICSNIGGAGLPTDADSLLDKQHSAGMAGPIPGSDVLKLENNHSPEEQVTEDMSVDDGLNSPVLTGRECVPLVASSEGGLPNTPCKLEILKDGPGRNGRSKSGGKDQENGSGKREGARDGSTSKKRSGERPDEGCTANGFSDHNFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRASPQEMRIVKIYIDTFLEDPASLAEQLVDTFTECISCKRTSVVPAGFCMKLWH 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02156 744 MobiDBLite consensus disorder prediction 453 493 - -
Adu01g02156 744 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 744 IPR044514 GO:0010048|GO:0040029
Adu01g02156 744 CDD FN3 354 435 IPR003961 GO:0005515
Adu01g02156 744 MobiDBLite consensus disorder prediction 598 650 - -
Adu01g02156 744 MobiDBLite consensus disorder prediction 92 108 - -
Adu01g02156 744 ProSiteProfiles Fibronectin type-III domain profile. 354 448 IPR003961 GO:0005515
Adu01g02156 744 MobiDBLite consensus disorder prediction 445 498 - -
Adu01g02156 744 MobiDBLite consensus disorder prediction 607 647 - -
Adu01g02156 744 MobiDBLite consensus disorder prediction 88 127 - -
Adu01g02156 744 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 744 - -
Adu01g02156 744 CDD PHD_VIN3_plant 162 227 - -
Adu01g02156 744 Gene3D Immunoglobulins 351 449 IPR013783 -
Adu01g02156 744 SUPERFAMILY Fibronectin type III 346 431 IPR036116 GO:0005515
Adu01g02156 744 Pfam PHD - plant homeodomain finger protein 142 261 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02156 Adu-Chr1 88890917 88895695 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02156 4 493 PHD Gene Family AT4G30200 52.874 2.00e-160 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02156 - - adu:107460123 1504.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02156 01 88890917 88895695 Adu01g02156 01 88890917 88895695 ECH