Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02153 ATGAAATACATTCGGACCAGCAGCTTGAAGAGGCTCTTCTCTCTGAAAAGGCGTAGTTTTGGAGACCAATCTCTGGGAACACTGAAGGATGGAGAGGAGATTGCAGTGAAGAGGCTCACAAGAACTTGCAGAGATGAGAGGAAAGAGAAAGAGTTTCTAACAGAGATTGGTACAATCGGCCATGTCCACCATAACAATGTTTTGCCTCTTCTTGGTTGCTGTATTGACAATGGCCTTTACCTTGTTTTCATGCTATCTACCAGAGGCTCTGTTGCATCCCTTCTTCATGATGAAAAGTTGGATACTTTGGATTGGAAAACAAGGCATAAGATAGCTGTTGGAACTGCACGTGGCCTCCATTACTTGCACAAAGGTTGCAAGAGAAGGATAATCCACCGAGACATTAAGGCATCAAATATTCTTTTGACAGAAGATTTTGAACCTCAGATATCTGATTTCGGATTAGCAAAATGGCTTCCATCTCAATGGAGTCATCATTCAATTGGCCCAATAGAAGGGACATTTGGTCATTTGGCACCAGAATACTATCTGCATGGAGTTGTGGATGAGAAGACAGATGTATTTGCTTTTGGTGTGTTCTTGCTTGAACTCATTTCTGGAAGAAAACCAGTTGATGGGTCTCACCAAAGCTTGCATACTTGGGCAAAACCAATATTGAAGAAAGGGGAGGAAGAGAAGCTTGTGGATCCAAGGCTTGAAGGGGAGTATGATGGAGGAGAGTTAAAGAGACTTGCCTTTGCAGCATCCTTGTGCATTCGGGCTTCTTCAATTTGGCGACCAACCATGACTCAGGTATTAGAGGTAATGGAAGAGGGTGAAATTGACAGAGAGAAGTGGAAAATGCCAGAGGAAGAAGAAGAGGAAGATGAAGAGGAAGAGTTTTGGGGTTTTGATGATCTTGAATATGAATATGACACTTCATTATCAATGTCACTACCTGATTCCACTGCAAGTACATATATTTAG 987 0.4225 MKYIRTSSLKRLFSLKRRSFGDQSLGTLKDGEEIAVKRLTRTCRDERKEKEFLTEIGTIGHVHHNNVLPLLGCCIDNGLYLVFMLSTRGSVASLLHDEKLDTLDWKTRHKIAVGTARGLHYLHKGCKRRIIHRDIKASNILLTEDFEPQISDFGLAKWLPSQWSHHSIGPIEGTFGHLAPEYYLHGVVDEKTDVFAFGVFLLELISGRKPVDGSHQSLHTWAKPILKKGEEEKLVDPRLEGEYDGGELKRLAFAASLCIRASSIWRPTMTQVLEVMEEGEIDREKWKMPEEEEEEDEEEEFWGFDDLEYEYDTSLSMSLPDSTASTYI 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02153 328 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Adu01g02153 328 ProSiteProfiles Protein kinase domain profile. 1 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g02153 328 Coils Coil 36 56 - -
Adu01g02153 328 Pfam Protein tyrosine and serine/threonine kinase 20 217 IPR001245 GO:0004672|GO:0006468
Adu01g02153 328 Gene3D Transferase(Phosphotransferase) domain 1 87 302 - -
Adu01g02153 328 SMART serkin_6 13 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g02153 328 PANTHER OS08G0249100 PROTEIN 20 308 - -
Adu01g02153 328 Gene3D Phosphorylase Kinase; domain 1 5 84 - -
Adu01g02153 328 SUPERFAMILY Protein kinase-like (PK-like) 5 276 IPR011009 -
Adu01g02153 328 PANTHER OS04G0654600 PROTEIN 20 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02153 Adu-Chr1 88871899 88876200 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02153 15 297 Receptor kinase-like Gene Family AT1G60800 42.955 2.36e-60 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Adu01g02153 PK_Tyr_Ser-Thr 1.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02153 - - aip:107642468 637.491