Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02146 ATGGCGGCAATCACCCTAGAGGAGATCAAGAACGAGACTGTTGATTTGGAGCGTATTCCTATTGAGGAAGTGTTCCAGCAACTGAAATGTTCGAGAGAAGGTTTGTCATCGGACGAAGGAGCCAATCGGCTTCAAATATTTGGCCCAAACAAGCTAGAAGAGAAGAAGGAAAGCAAACTCCTCAAGTTTCTTGGGTTCATGTGGAATCCCCTGTCATGGGTCATGGAAGCTGCAGCTATCATGGCTATTGCACTTGCAAATGGTGATAGCAAGCCTCCGGATTGGCAAGATTTCGTTGGTATCATTTGCTTGTTGTTTATTAACTCCACCATCAGTTTCATTGAAGAAAACAATGCTGGAAATGCTGCTGCTGCTCTTATGGCTGGACTTGCTCCCAAGACTAAGGTCCTTAGAGGTGGAAAATGGTCTGAGGAAGAAGCAGCAATTCTGGTCCCTGGAGACATCATTAGCATCAAACTAGCACACCTTGTGGATAGCACCAACCAAGTTGGACACTTCCAGAAGGTTCTCACAGCAATTGGAAACTTCTGCATATGTTCCATTGCTGTTGGTATGTTGGCTGAGATCATAGTCATGTACCCTATTCAGCATCGCAAATATAGAGATGGAATTGACAACCTGTTGGTCCTCTTGATTGGTGGAATCCCCATTGCTATGCCAACTGTGTTGTCTGTCACAATGGCCATTGGCTCTCACAGGCTCTCTCAGCAGGGTGCTATCACCAAGCGTATGACTGCCATTGAAGAAATGGCCGGCATGGATGTCCTCTGCAGTGACAAGACTGGGACACTCACCCTGAACAAGCTGAGCGTTGACAGGAACTTGATTGAGGTTTTTGCAAAGGGTGTGGACAAGGAACATGTTATCCTTCTTGCTGCAAGGGCTTCCAGGACTGAAAACCAGGATGCAATAGATGCTGCCATTGTTGGAATGCTTGCCGACCCAAAAGAGGCAAGGGCTGGGATAAGAGAGGTGCATTTCTTGCCATTCAATCCAGTTGACAAGAGAACAGCTTTGACTTACATCGATTCTGATGGAAATTGGCACAGGGCAAGCAAAGGTGCTCCTGAGCAGATCATTGCCTTGTGTAACCTTAGGGAAGATGCTAAGAAAAGGTGCCATGCTATTATTGACAAGTTTGCAGACAGAGGGCTTCGTTCGCTCGCTGTTGCTAGACAGGAAGTTCCAGAGAGAACAAAGGAAAGTGCCGGTGGTCCATGGCAGTTTGTTGGTTTGTTGCCACTATTTGATCCCCCAAGACATGATAGTGCTGAGACTATCCGACAAGCTCTTAACCTCGGCGTAAATGTCAAGATGATTACTGGTGATCAACTTGCCATTGCTAAGGAGACCGGCCGGAGGCTTGGGATGGGAACAAATATGTATCCGTCTGCTTCCTTACTTGGTCAAGACAAGGATGCAAGTATTGCTGCACTTCCAGTGGAAGAGCTGATTGAGAAGGCTGATGGATTTGCTGGAGTATTTCCAGAGCACAAATATGAAATTGTCAAAAAGTTACAAGAGAGGAAACACATTTGTGGAATGACCGGAGATGGTGTCAATGATGCTCCTGCTTTGAAGAAGGCTGATATTGGAATTGCTGTTGCTGATGCCACTGATGCTGCAAGAAGTGCTTCTGATATTGTCTTGACTGAACCAGGATTGAGTGTTATTGTTAGTGCAGTCTTAACCAGCAGAGCTATTTTCCAAAGAATGAAGAACTATACGATCTATGCAGTATCTATCACCATCCGTATAGTGTTTGGCTTCATGCTCATTGCACTTATCTGGAAGTTCGACTTCTCGCCTTTCATGGTTTTGATCATTGCCATTCTAAATGATGGAACAATAATGACAATTTCGAAGGATCGTGTGAAGCCATCTCCCTTGCCTGATAGCTGGAAACTGCAAGAAATATTCGCCACTGGGACTGTTCTTGGAAGTTACTTGGCATTGATGACTGTCATATTCTTCTGGGCAATGAAAGAAACTAGCTTCTTCCCTGAAAAATTTGGAGTTAGACACCTTAGTCATGATGAAATGATGTCTGCTCTATATCTACAAGTCAGTATTGTTAGCCAGGCTTTGATCTTTGTAACTCGTTCACGCAGCTGGTCTTTCGTTGAACGCCCCGGATTGTTATTGGTCTCTGCTTTTATTATTGCTCAGCTGATTGCTACAATCATAGCAGTATATGCGGATTGGGGATTCGCAAAGGTGAAAGGAATTGGTTGGGGTTGGGCTGGAGTCATCTGGCTCTACAGTGTTGTCTTCTATATTCCTCTGGACTTCATGAAGTTCGCCATCCGCTACATCTTGAGCGGCAAGGCTTGGGTAAATCTGCTAGAAAACAAGACTGCCTTCACCACCAAGAAAGACTATGGTAAGGAAGAGAGGGAAGCTCAGTGGGCTCTTGCTCAGAGGACTCTGCATGGTCTTCAACCACCGGATACTTCCGGCATCTTCAATGAGAAGAATAGTTATAGGGAACTCTCCGAGATTGCCGAGCAAGCCAAGAGAAGAGCCGAAGTTGCAAGGCTTCGTGAGCTTCACACACTAAAGGGACATGTTGAGTCAGTGGTGAAGCTAAAAGGTTTGGACATTGATACAATCCAACAGCACTATACTGTCTGA 2655 0.4539 MAAITLEEIKNETVDLERIPIEEVFQQLKCSREGLSSDEGANRLQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIALANGDSKPPDWQDFVGIICLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRGGKWSEEEAAILVPGDIISIKLAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMLAEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVDKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQIIALCNLREDAKKRCHAIIDKFADRGLRSLAVARQEVPERTKESAGGPWQFVGLLPLFDPPRHDSAETIRQALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLQEIFATGTVLGSYLALMTVIFFWAMKETSFFPEKFGVRHLSHDEMMSALYLQVSIVSQALIFVTRSRSWSFVERPGLLLVSAFIIAQLIATIIAVYADWGFAKVKGIGWGWAGVIWLYSVVFYIPLDFMKFAIRYILSGKAWVNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPDTSGIFNEKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02146 884 Gene3D - 261 560 IPR023214 -
Adu01g02146 884 SFLD p-type atpase 246 575 IPR044492 -
Adu01g02146 884 PRINTS P-type cation-transporting ATPase superfamily signature 523 542 - -
Adu01g02146 884 PRINTS P-type cation-transporting ATPase superfamily signature 418 429 - -
Adu01g02146 884 PRINTS P-type cation-transporting ATPase superfamily signature 440 450 - -
Adu01g02146 884 PRINTS P-type cation-transporting ATPase superfamily signature 264 278 - -
Adu01g02146 884 PRINTS P-type cation-transporting ATPase superfamily signature 546 558 - -
Adu01g02146 884 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 498 611 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu01g02146 884 Pfam haloacid dehalogenase-like hydrolase 260 537 - -
Adu01g02146 884 PANTHER PLASMA MEMBRANE ATPASE 3 160 - -
Adu01g02146 884 PANTHER PLASMA MEMBRANE ATPASE 159 864 - -
Adu01g02146 884 PANTHER CALCIUM-TRANSPORTING ATPASE 3 160 - -
Adu01g02146 884 Gene3D - 168 748 - -
Adu01g02146 884 PANTHER CALCIUM-TRANSPORTING ATPASE 159 864 - -
Adu01g02146 884 Coils Coil 835 855 - -
Adu01g02146 884 CDD P-type_ATPase_H 34 774 IPR006534 GO:0008553|GO:0016021|GO:0120029
Adu01g02146 884 Gene3D - 833 884 - -
Adu01g02146 884 SFLD C1.7: P-type atpase like 246 575 - -
Adu01g02146 884 SMART Cation_ATPase_N_a_2 15 87 IPR004014 -
Adu01g02146 884 ProSitePatterns E1-E2 ATPases phosphorylation site. 266 272 IPR018303 -
Adu01g02146 884 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 159 739 IPR006534 GO:0008553|GO:0016021|GO:0120029
Adu01g02146 884 Pfam E1-E2 ATPase 160 243 - -
Adu01g02146 884 SUPERFAMILY Calcium ATPase, transmembrane domain M 15 780 IPR023298 -
Adu01g02146 884 PRINTS H+-transporting ATPase (proton pump) signature 523 539 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu01g02146 884 PRINTS H+-transporting ATPase (proton pump) signature 693 714 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu01g02146 884 PRINTS H+-transporting ATPase (proton pump) signature 554 579 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu01g02146 884 PRINTS H+-transporting ATPase (proton pump) signature 495 511 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu01g02146 884 PRINTS H+-transporting ATPase (proton pump) signature 380 398 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu01g02146 884 SUPERFAMILY HAD-like 260 570 IPR036412 -
Adu01g02146 884 Gene3D - 66 142 - -
Adu01g02146 884 Gene3D - 276 423 IPR023299 GO:0000166
Adu01g02146 884 Pfam Cation transporter/ATPase, N-terminus 19 81 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02146 Adu-Chr1 88783183 88788526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02146 6 884 Primary Pumps ATPases AT5G57350 77.590 0.0 1439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02146 K01535 - gmx:100816905 1360.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02146 01 88783183 88788526 Adu04g01183 04 25469854 25478437 PCT