Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02114 ATGTCATCATCGTGTTTAAGTGGAGCTGGCGGAAGAACCTATGGCTTCGAATTCGAATTCGTTAAGTCAACATCTTCATCAATCACCAGAACTTCACACACTTCATCATCACCGTCTTCAACAATCTCCGAATCCAGCAACAGCCAGCTGGCAATCTCCACGCGTAAGCCCAGAACCGCTCGCAAGCGACCCAATCAAACCTACAACGAAGCCGCGGCGCTTCTCTCCACCGCATACCCCAACCTCTTCTCATCCAACACCCTCAAAAGCTTCGCCAAACCATCGCCGCAATACAGTAACGGTAATATTTCCAATACGGCGTCGTTTTTGGACGACTCGTCGGACCTGTTGTTGCCGTTCAGGGTGTTCGATACGTCGTCGTTTCTGCTCCACCAGTACAAGCCGTCGTGCTTCGCGGTGGAGCCTAAAGTGGTGAGTGTGCAGCACGAGAAGCCATGCCAGAGCCCAGGGGAGATAAGCTCCAGGGTGAATTCCTTGGAATTGGAGGACCATAACAATAACCATTGCTGCGCCGGAGAAGACGATTTCGATGCCGAATCGATGCTCGACGAGGAAATCGAGGAGGGAATTGATAGCATCATGGGGAGCGGGGTAGAATTGGAATCGTCCTCCATTGATGGAGCTTCTTCGGATAATAATCCGTGGAGTTGTTTTGGCGGGAAACTGGATTTCCGGCTAGGGTTGCGGAGGGCCGGAGTGAGGGCTCTCCGAAGCGCCGACGACGGCAATTGGTGGAATTTCCCGGCGGTTGATATCCTTCAGATATCGCCTAAGGCCGTAAACAAGCCTGCGCCGCAACAACCGGTGGCTGCGGCAGCTGAAAAGGCGAAGAAGAAGAAGAAGAAGGTGGAGAAACCGAGCGTTGAGGTGAAGAATAAGAGCGATGAATTTCCGAAGCTGAATAATATTCATGCCGCTGTTCCGAAATTGAATTCCGGATTGATGTTGAAATTGAATTACGACGGTGTCAGGGATAGTTGGTCCGACAGGGGCTCGCCGTTCGGCGACGACGGCTCAGCCTCCGACTTGCCGGGAAATGACGTCACCGCACGATTGTCACAAATCGATTTGTTATGGGAGAATGGGGGAATGAGAGAGGCTAGCGTGCTTCGCTACAAAGAAAAGCGGCGTACACGCCTCTTCTCGAAGAAGATCAGGTACCAAGTCAGGAAGGTCAACGCAGATCGACGGCCCAGAATGCAGGTACGACCCAGCTGA 1239 0.5246 MSSSCLSGAGGRTYGFEFEFVKSTSSSITRTSHTSSSPSSTISESSNSQLAISTRKPRTARKRPNQTYNEAAALLSTAYPNLFSSNTLKSFAKPSPQYSNGNISNTASFLDDSSDLLLPFRVFDTSSFLLHQYKPSCFAVEPKVVSVQHEKPCQSPGEISSRVNSLELEDHNNNHCCAGEDDFDAESMLDEEIEEGIDSIMGSGVELESSSIDGASSDNNPWSCFGGKLDFRLGLRRAGVRALRSADDGNWWNFPAVDILQISPKAVNKPAPQQPVAAAAEKAKKKKKKVEKPSVEVKNKSDEFPKLNNIHAAVPKLNSGLMLKLNYDGVRDSWSDRGSPFGDDGSASDLPGNDVTARLSQIDLLWENGGMREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMQVRPS 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02114 412 Pfam CCT motif 372 410 IPR010402 GO:0005515
Adu01g02114 412 MobiDBLite consensus disorder prediction 28 65 - -
Adu01g02114 412 PANTHER OS02G0148000 PROTEIN 1 408 - -
Adu01g02114 412 ProSiteProfiles CCT domain profile. 372 412 IPR010402 GO:0005515
Adu01g02114 412 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 408 - -
Adu01g02114 412 MobiDBLite consensus disorder prediction 28 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02114 Adu-Chr1 88367850 88370854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02114 321 410 C2C2-CO-like Transcription Factor Family AT1G25440 43.243 1.23e-16 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu01g02114 CCT 6.6e-13 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02114 - - adu:107496352 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02114 01 88367850 88370854 Adu01g02114 01 88367850 88370854 ECH