Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02110 ATGGAGGACTGTGAGGATTACAAGAATTACTGGGAGACCAACATGTTCCTCCAAACCCAAGAGTTGGACAGCTGGCAATTGGATGAGGCCTTCTCCGGCGGCTACTACGATTCAAGCTCTCCGGACGGCGGAGCTTCATCGGCGGCATCTAATAAGAACATTGTCTCCGAGAGAAATAGGAGGAAGAAGCTCAATGAAAGACTCTTTGCACTTAGGGCAGTGGTTCCCAACATCACCAAGATGGATAAGGCATCAATCATAAAGGATGCAATTGATTACATAGAGCACTTGCATGAACAAGAGAAAAGGATCCAAGATGAGATAATGGAGCTTGAATCTGAGAAGCTCAAGAATCCAATTATTGCAGCAGCAGGAGACTACGATTTTGAACAGGATCTTCCCGTTCTTCTCAGATCTAAGAAGAAGAGACCCGATAACCTTCTCTTTGATACCTCAGCTTCTTCTTCCTCAAGAAATAACATCAACTATTTTCCTATTGAACTCATTGATCTGAGGGTAACATACAAGGGAGAGAAGATATTTGTGGTGAGCTTGACATGCAGCAAAAGAACAGATACAATGGTGAAACTGTGTGAGGTCTTTGAATCTTTAAAGCTCAAGATCATCACTGCTAATATTACTTCTTTCTCAGGCACACTCTCCGAGACGCTCTTTGTTGAGGCAGATGAAGAAGAAAAAGATCATCTGCAGATAAGGATCCAAACAGCCATTGCAGCTCTTAATGATCCCCAAAGCCCAATGAGCATCTGA 771 0.4319 MEDCEDYKNYWETNMFLQTQELDSWQLDEAFSGGYYDSSSPDGGASSAASNKNIVSERNRRKKLNERLFALRAVVPNITKMDKASIIKDAIDYIEHLHEQEKRIQDEIMELESEKLKNPIIAAAGDYDFEQDLPVLLRSKKKRPDNLLFDTSASSSSRNNINYFPIELIDLRVTYKGEKIFVVSLTCSKRTDTMVKLCEVFESLKLKIITANITSFSGTLSETLFVEADEEEKDHLQIRIQTAIAALNDPQSPMSI 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02110 256 Coils Coil 94 117 - -
Adu01g02110 256 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 5 250 - -
Adu01g02110 256 MobiDBLite consensus disorder prediction 36 57 - -
Adu01g02110 256 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 50 113 IPR036638 GO:0046983
Adu01g02110 256 Pfam Helix-loop-helix DNA-binding domain 55 98 IPR011598 GO:0046983
Adu01g02110 256 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 48 97 IPR011598 GO:0046983
Adu01g02110 256 SMART finulus 54 103 IPR011598 GO:0046983
Adu01g02110 256 PANTHER TRANSCRIPTION FACTOR BHLH35 5 250 - -
Adu01g02110 256 MobiDBLite consensus disorder prediction 39 54 - -
Adu01g02110 256 Gene3D - 47 121 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02110 Adu-Chr1 88336013 88339490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02110 1 227 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 58.442 1.08e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu01g02110 HLH 8.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02110 - - adu:107496381 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02110 01 88336013 88339490 Adu01g02110 01 88336013 88339490 ECH
Adu01g02110 01 88336013 88339490 Adu04g01273 04 29818565 29828776 PCT