Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02102 ATGAGTTATGGAAAGGACGACATAGAAGCTCCTCGGAGCTCCGGTGACATCGACGACGGAGGCTCCTCCTCCAGTCCCTTTGATATTGCCAGAACAAAAGATGCTTCCGTTCAACGACTCAAGCGTTGGAGGCAAGCAGCGCTTGTGCTTAACGCTTCTCGCCGATTTCGCTACACCTTGGACCTGAAGAAAGAAGAAGAAAAGGAGCAAGTGCTGAGAAAGATTAGAGGGCATGTTCAAGTCATCAGAGCAGCGTATCTTTTCAAGGAGTCTGCAAAAAAATTGAATAGTGAATTAGGAATCGCCCCACATCCTACAAGCACCACCGGAGAATTTCAAATTGGGCTAGAGTTACTTTCTTCAATTGCAAGGGATCATAATACTGCTACTCTGCAAGAAAAAGGAGGGGTTGAAGGGATAGCAAGTTTGTTGGAGACCAATTTAGAAAAGGGGATTCAAGGTGATGACACTGACTTGTCAAGACGGACAAAGGCTTTTGGCTCGAACAACTATCCTCGAAAGAAAGGAAGAAGTTTCTTGATGTTTGTTTGGGATGCTTGCAAGGATCTGACCTTGATTATTTTAATGGTAGCTGCTGCAGCTTCATTAGTACTGGGGATAAAATCTGAGGGTATTAAGGAAGGATGGTATGATGGTGGAAGCATTGCTTTTGCAGTTATTCTTGTTATTGTTGTTACAGCTATAAGTGATTATAAGCAGTCTCTTCAGTTTCGGGACCTAAATGAGGAGAAGAGAAACATTCGTTTGGAGGTCATTAGAGGAGGTAGAAGAGTTGAGATCTCAATCTATGATATTGTTGTTGGTGATGTCATACCCCTTAACATTGGTGACCAGGTCCCTGCTGATGGAATTTTGATCGTCGGTCACTCTCTTGCAGTTGATGAATCTAGTATGACTGGGGAGAGCAATATTGTTGAAAAGAATTCTAAGAACCCTATTCTGATATCTGGTTGTAAAGTTGCAGATGGCAATGGTCTTATGCTCGTAACGGCTGTTGGTATTAATACCGAATGGGGGCTTCTAATGGCTAACATTTCAGAAGACAATGGTGAAGAAACACCTTTGCAGGTACGCTTGAATGGTCTTGCCACCTTCATTGGTATAATTGGGCTCTCTGTGGCTGTCATCGTTCTGGTTGTGCTACTGGCCAGGTATTTCTCTGGGCATTCTAGAAACCCAGATGGAAGTGTTCAATTTACAGCTGGCAAGACTAAACTCAGTACTGCAATTGATGGAGCAATAAAGATAGTCACTGTTGCGGTCACTATTGTAGTGGTTGCAGTACCTGAAGGACTCCCTTTAGCAGTTACCTTAACACTTGCCTACTCTATGAGAAAAATGATGGCAGATAAAGCTTTGGTACGTAGGCTTTCTGCCTGTGAGACTATGGGCTCAGCCACAACTATTTGCAGTGATAAGACTGGAACATTGACTATGAATCAGATGACTGTGGTTGAGGCTATCATTGGTGGGGAGAACATTGATCCTCCTCACGAGAAGTCAAAGCTCAAACCTATACTCTGCTCGTTGCTGATTGAAGGAGTTGCACAGAACACCAATGGCAGTGTTTTTGTACCTGAGGGTAGTAACAATGTTGAGGTTTCTGGATCACCAACGGAGAAGGCAATTTTACATTGGGCTGTTCAGCTTGGGATGAATTTTAAAGCCGCTAGAGCAGAATCATCAATTATTCATGTCTTCCCATTCAATTCAGATAAAAAACGAGGCGGGGTTGCAGTACAGACGACTGAATCTGAAATCCATATACATTGGAAAGGGGCTGCTGAGATAGTCCTAGGCTGCTGTACACAGTATATGGATGTAAATGATCACTTAATAGAGATGGATGAAGGAAAGATGAACTATTTTAGAAGAGCTATTGAAGATATGGCTTCTCGTAGTCTACGGTGTGTTGCCATTGCGTATAGATTATATGAAATGGAGAAAGTTCCAACCAGTGAAGACCTTGCTCACTGGTCATTACCTGAGGATAATCTCATCTTATTGGCTATTGTTGGTCTGAAGGATCCTTGTCGACCTGGTGTGAAAGATGCGGTGAAACTTTGCCAGAAAGCTGGAGTTAAGGTAAAAATGGTCACCGGTGACAATGTCAAAACTGCAACAGCAATTGCCGTGGAATGTGGAATACTTAATTCATATTCCGAAGCTACAGAGCCATATGTCATCATTGAAGGAAAAGACTTCCGTGCGATGCAAGATGCAGAGAGATTAGAAATTGTTGAAAAGATATCAGTTATGGGACGATCGTCTCCGAATGACAAGCTTTTGCTCGTGCAAGCACTGAGGAGGAAGGAGCATGTTGTTGCTGTAACTGGAGACGGAACTAATGATGCTCCTGCCTTACATGAGGCTGATATAGGTCTTGCAATGGGGATTCAAGGTACAGAAGTTGCGAAAGAGAGCTCTGATATCATTATATTGGATGACAATTTTGCTTCAGTTGTAAAGGTTGTCAGGTGGGGGAGGTCTGTGTATGCAAATATTCAGAAATTTATCCAGTTTCAGCTTACAGTGAATATAGCAGCTCTTGTTATAAATGTTATTGCTGCATTTTCTTCCGGTGACGTACCACTAAATACAGTACAGCTTCTGTGGGTAAATCTTATCATGGATACACTTGGAGCTCTAGCCTTGGCAACTGAACCACCAACTGATCATCTAATGGATCGTGATCCAATGGGTCGAAGAGAACCTCTTATATCAAATATTATGTGGAGGAATCTGCTGATACAGGCAATTTACCAAGTGTCTGTCCTACTTATACTCAATTTCCGAGGCATTTCCATACTGAATTTGGCACACAAGTCCAGTGACCACGCACTCAAAGTGAAGGACACTTTGATATTCAATGCCTTTGTTCTCTGTCAAGTTTTTAATGAATTTAATGCCCGCAAGCCGGATGAGTTCAATATATTCAAGGGAGTCACAAGAAACTACCTCTTTATGGGGATAGTGGCATTAACTGTAGTACTTCAGATCATCATCATTGAATTTCTCGAAAAGTTCGTTAAAACAGTCAAGCTAACTTGGCAACAGTGGCTCATTTGTGTCATCATTGGATTTATCAGCTGGCCTCTTGCTGTGGTTGGAAAACTGATACCAGTACCAGAAAAGCAGCTCAGTAACTCTTTTAGGAAGTGTACTAACCGTGTTCGAAGGTGTTTTTGTCGACCAGAAAAACTGTGA 3228 0.4238 MSYGKDDIEAPRSSGDIDDGGSSSSPFDIARTKDASVQRLKRWRQAALVLNASRRFRYTLDLKKEEEKEQVLRKIRGHVQVIRAAYLFKESAKKLNSELGIAPHPTSTTGEFQIGLELLSSIARDHNTATLQEKGGVEGIASLLETNLEKGIQGDDTDLSRRTKAFGSNNYPRKKGRSFLMFVWDACKDLTLIILMVAAAASLVLGIKSEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFRDLNEEKRNIRLEVIRGGRRVEISIYDIVVGDVIPLNIGDQVPADGILIVGHSLAVDESSMTGESNIVEKNSKNPILISGCKVADGNGLMLVTAVGINTEWGLLMANISEDNGEETPLQVRLNGLATFIGIIGLSVAVIVLVVLLARYFSGHSRNPDGSVQFTAGKTKLSTAIDGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEAIIGGENIDPPHEKSKLKPILCSLLIEGVAQNTNGSVFVPEGSNNVEVSGSPTEKAILHWAVQLGMNFKAARAESSIIHVFPFNSDKKRGGVAVQTTESEIHIHWKGAAEIVLGCCTQYMDVNDHLIEMDEGKMNYFRRAIEDMASRSLRCVAIAYRLYEMEKVPTSEDLAHWSLPEDNLILLAIVGLKDPCRPGVKDAVKLCQKAGVKVKMVTGDNVKTATAIAVECGILNSYSEATEPYVIIEGKDFRAMQDAERLEIVEKISVMGRSSPNDKLLLVQALRRKEHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNIAALVINVIAAFSSGDVPLNTVQLLWVNLIMDTLGALALATEPPTDHLMDRDPMGRREPLISNIMWRNLLIQAIYQVSVLLILNFRGISILNLAHKSSDHALKVKDTLIFNAFVLCQVFNEFNARKPDEFNIFKGVTRNYLFMGIVALTVVLQIIIIEFLEKFVKTVKLTWQQWLICVIIGFISWPLAVVGKLIPVPEKQLSNSFRKCTNRVRRCFCRPEKL 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02102 1075 Gene3D - 185 1038 - -
Adu01g02102 1075 PRINTS P-type cation-transporting ATPase superfamily signature 301 315 - -
Adu01g02102 1075 PRINTS P-type cation-transporting ATPase superfamily signature 477 491 - -
Adu01g02102 1075 PRINTS P-type cation-transporting ATPase superfamily signature 677 688 - -
Adu01g02102 1075 PRINTS P-type cation-transporting ATPase superfamily signature 699 709 - -
Adu01g02102 1075 PRINTS P-type cation-transporting ATPase superfamily signature 785 804 - -
Adu01g02102 1075 PRINTS P-type cation-transporting ATPase superfamily signature 809 821 - -
Adu01g02102 1075 Pfam Ca2+-ATPase N terminal autoinhibitory domain 25 67 IPR024750 GO:0005516
Adu01g02102 1075 SUPERFAMILY HAD-like 475 890 IPR036412 -
Adu01g02102 1075 Gene3D - 157 353 - -
Adu01g02102 1075 PANTHER CATION TRANSPORTING ATPASE 19 1064 - -
Adu01g02102 1075 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 126 1049 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Adu01g02102 1075 CDD P-type_ATPase_Ca_PMCA-like 159 918 - -
Adu01g02102 1075 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 484 681 IPR023299 GO:0000166
Adu01g02102 1075 Pfam Cation transporter/ATPase, N-terminus 134 202 IPR004014 -
Adu01g02102 1075 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 417 509 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu01g02102 1075 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 222 391 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu01g02102 1075 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 752 865 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu01g02102 1075 SFLD p-type atpase 459 837 IPR044492 -
Adu01g02102 1075 PANTHER CALCIUM-TRANSPORTING ATPASE 19 1064 - -
Adu01g02102 1075 Gene3D - 35 90 - -
Adu01g02102 1075 MobiDBLite consensus disorder prediction 1 30 - -
Adu01g02102 1075 Pfam haloacid dehalogenase-like hydrolase 474 799 - -
Adu01g02102 1075 PRINTS Sodium/potassium-transporting ATPase signature 220 240 - -
Adu01g02102 1075 PRINTS Sodium/potassium-transporting ATPase signature 470 491 - -
Adu01g02102 1075 PRINTS Sodium/potassium-transporting ATPase signature 596 614 - -
Adu01g02102 1075 PRINTS Sodium/potassium-transporting ATPase signature 857 878 - -
Adu01g02102 1075 SFLD C1.7: P-type atpase like 459 837 - -
Adu01g02102 1075 SMART Cation_ATPase_N_a_2 131 207 IPR004014 -
Adu01g02102 1075 Gene3D - 487 684 IPR023299 GO:0000166
Adu01g02102 1075 SUPERFAMILY Calcium ATPase, transmembrane domain M 134 1048 IPR023298 -
Adu01g02102 1075 Pfam E1-E2 ATPase 255 455 - -
Adu01g02102 1075 Pfam Cation transporting ATPase, C-terminus 870 1047 IPR006068 -
Adu01g02102 1075 ProSitePatterns E1-E2 ATPases phosphorylation site. 479 485 IPR018303 -
Adu01g02102 1075 SUPERFAMILY Calcium ATPase, transduction domain A 255 349 IPR008250 -
Adu01g02102 1075 Gene3D - 474 830 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02102 Adu-Chr1 88225156 88237051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02102 10 1067 Primary Pumps ATPases AT4G29900 71.696 0.0 1538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02102 K01537 - gmx:100820121 1651.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02102 01 88225156 88237051 Adu01g02102 01 88225156 88237051 ECH
Adu01g02102 01 88225156 88237051 Adu03g02016 03 37695474 37712509 PCT