Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02093 ATGATGTTATCATCTACTAATAATAATAGAGTGATGAAGATGGAAGATGATGCAGAAGAAGAAGAAGAATGCATGACTGGGCTTTCTCTTGCTCTAGTGCCAAACAAGAAGAAGAACAAGCCTCTTATGGTTTCCCTTCATCAGAAGAAATTCTGTTCTACTCATCAGAGAATCGATGATGATGGAGGACACCACCACCACCACCATCACAACAACAAGAAACTCAGGCTTACAAAGGAGCAATCAACCATGCTTGAAAACAGCTTCAACCAGCATACCACTCTTAATTCAGCCCAGAAAAAATCACTTGCTGAAGAATTGAATCTAAAGACAAGACAAATTGAAGTTTGGTTTCAGAACAGAAGAGCTAGGACGAAGCTGAAACAGACGGAGGTGGATTGTGAGTTGTTGAAGAAACGGTGCCAAAGTTTAACAGATGAGAACCGAAGGTTGAAGAAGGAGTTGGAGGAAGTAACTGCTGCACTCAAAGCTACAACAACAACATCGCCACCATCATTATACATTCAACACTCCAAAGCTTCACCGGCTACCACTCTCACTATGTGTTCTTCATGCCACAAACTGCTTATTCCAAATTCAAATTAA 606 0.4076 MMLSSTNNNRVMKMEDDAEEEEECMTGLSLALVPNKKKNKPLMVSLHQKKFCSTHQRIDDDGGHHHHHHHNNKKLRLTKEQSTMLENSFNQHTTLNSAQKKSLAEELNLKTRQIEVWFQNRRARTKLKQTEVDCELLKKRCQSLTDENRRLKKELEEVTAALKATTTTSPPSLYIQHSKASPATTLTMCSSCHKLLIPNSN 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02093 201 ProSitePatterns 'Homeobox' domain signature. 103 126 IPR017970 GO:0000981|GO:0006355
Adu01g02093 201 PANTHER - 18 194 - -
Adu01g02093 201 Pfam Homeobox associated leucine zipper 128 162 IPR003106 GO:0006355|GO:0043565
Adu01g02093 201 SMART HOX_1 70 132 IPR001356 GO:0003677
Adu01g02093 201 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT9 18 194 - -
Adu01g02093 201 CDD homeodomain 73 129 IPR001356 GO:0003677
Adu01g02093 201 Pfam Homeodomain 73 126 IPR001356 GO:0003677
Adu01g02093 201 SMART halz 128 171 IPR003106 GO:0006355|GO:0043565
Adu01g02093 201 Coils Coil 120 168 - -
Adu01g02093 201 SUPERFAMILY Homeodomain-like 58 129 IPR009057 -
Adu01g02093 201 ProSiteProfiles 'Homeobox' domain profile. 68 128 IPR001356 GO:0003677
Adu01g02093 201 Gene3D - 63 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02093 Adu-Chr1 88142117 88143015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02093 48 194 Homeobox Transcription Factor Family AT3G60390 55.782 8.94e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Adu01g02093 Homeodomain 1.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02093 K09338 - lang:109339930 179.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02093 01 88142117 88143015 Adu03g02037 03 38682503 38684337 PCT