Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02073 ATGCCTCCAAGAATCCTGTTATGCGGCGACGTTTTTGGGCGGCTAAACCAGCTCTTCAAGCGCGTCTCATCGGTGAACAAATCGGCGGGTCCATTCGACGCGCTTTTCTGCGTGGGCCAGTTCTTCCCGGACTCGCCGGAGCAGCTCGACGAGTTCATGGCCTACGTCGAAGGCAGCTCCCAAATTCCGATTCCTACTTACTTCATCGGCGACTATGGCGTCGGTGCCGCTAAAGTATTGCTGGCGGCTTCCAAGGACTCCGCCAATCGTGGTTTCAAGATGGACGGTCTCAGAGTCTGCGAAAACTTGTTCTGGTTGAAAGGCAGTGGCAATTTCTCCCTCTTTGGTTTATGTGTGGCCTATTTATCCGGGAGAAAATCACCGGAAGGGCAACAGTTTGGAACCTACAGTCAGGATGATGTTGATGCTTTGCGAGCAATAGCCGAGGAGCCCGGAATTGTCGACTTCTACCATATTGCAGGCACTAAAGGTATATACTATACCCGTGAACCATATTCCAATGTTGATGCTGTGCATGTGACTCGTTTCATAGGGCTTGCTTCTGTTGGAAATAAAGATAAGCAGAAATTTATTCATGCACTTTCTCCCACTCCAGCATCTACCATGTCTTCCACTGAGATTGCCATGAAAACCACAAATAGCACCTTATCACCATACACACTCATGGAAAAAAGTACATCTCCGAAGGATGTCTCTAAGAGATCTGGTGATGTGATGTCTGACGATCAATATTGGAGATATGATGTTTCTCAAAAGCGTCGAAGACATGATGCTGGGGAAGGGGAAAAAATATGTTTCAAATTTGTATCTTCTGGTTCTTGCCCACGTGGAGAGAAGTGCAATTTTCGACACGATGGGGATGCAAGGGAACAATATAAGAGAGGGGTTTGCTTTGATTTTTTGAATAAAGGAAAATGTGAAAGGGGTCCAGATTGCAGCTTTAAGCACAGTTTGCAGAATGAAGGCGATATGCCTCCTTCTAGGCGGCCTGGATCTGAAAATACTAGATCAAAAGAATGTTGGTTTTGCTTGTCAAGCCCCAATGTGGAGTCTCACTTGATCATAAGCATTGGTGAAAATTACTACTTGGCACTGGCTAAAGGTCCACTTGTTGAAGACCATGTGCTGATAGTACCAGTTGAGCATATGCCAAGTACCTTGTCTCTGTCATCTGAATCTGAAGTTGAGCTCTGTCGGTTTCAGAACAGTCTTCAGAGGTATTGCAAGAGCCAGGGAAAGGAAGTCATCTTTTTTGAGTGGGTTTCCATACGCGGCACTCATGCAAATCTTCAGGCCATTCCTATTCCATCTTCCAAGGCAGTTATGGTTGAAAAGGCATTCAATTTAGCTGCACAAAAGATGGGATTTAAATTTGTGTCCAAGAGTTTTGATAGCATTTCTGATGGAAGAAAATTTCTGAAGACACAAGCTGATGGGGAGTCAAGTTTGTTCTATGCCGAAATCCCAGGAGGCACAATTCTGCTGCACCGTGTTGAGGAGAAAGTGAGATTCCCTGCCCAATTTGGACGTGAGGTCCTGGCAGGGTTGCTCAATATGGCAGACAATGCAGACTGGAGGAATCGCAAACATAACAAAGAGGAAGAAATGAAAATTGTAGAAGATTTCAAGAGCCGATTTCAAGAATATGATCCAAACTGTTAA 1683 0.4522 MPPRILLCGDVFGRLNQLFKRVSSVNKSAGPFDALFCVGQFFPDSPEQLDEFMAYVEGSSQIPIPTYFIGDYGVGAAKVLLAASKDSANRGFKMDGLRVCENLFWLKGSGNFSLFGLCVAYLSGRKSPEGQQFGTYSQDDVDALRAIAEEPGIVDFYHIAGTKGIYYTREPYSNVDAVHVTRFIGLASVGNKDKQKFIHALSPTPASTMSSTEIAMKTTNSTLSPYTLMEKSTSPKDVSKRSGDVMSDDQYWRYDVSQKRRRHDAGEGEKICFKFVSSGSCPRGEKCNFRHDGDAREQYKRGVCFDFLNKGKCERGPDCSFKHSLQNEGDMPPSRRPGSENTRSKECWFCLSSPNVESHLIISIGENYYLALAKGPLVEDHVLIVPVEHMPSTLSLSSESEVELCRFQNSLQRYCKSQGKEVIFFEWVSIRGTHANLQAIPIPSSKAVMVEKAFNLAAQKMGFKFVSKSFDSISDGRKFLKTQADGESSLFYAEIPGGTILLHRVEEKVRFPAQFGREVLAGLLNMADNADWRNRKHNKEEEMKIVEDFKSRFQEYDPNC 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02073 560 Pfam Protein similar to CwfJ C-terminus 1 341 454 IPR006768 -
Adu01g02073 560 SUPERFAMILY CCCH zinc finger 298 326 IPR036855 GO:0046872
Adu01g02073 560 ProSiteProfiles Zinc finger C3H1-type profile. 266 294 IPR000571 GO:0046872
Adu01g02073 560 Pfam Protein similar to CwfJ C-terminus 2 486 557 IPR006767 -
Adu01g02073 560 Gene3D - 255 325 - -
Adu01g02073 560 SUPERFAMILY CCCH zinc finger 265 292 IPR036855 GO:0046872
Adu01g02073 560 PANTHER CWF19-LIKE PROTEIN 1 2 156 - -
Adu01g02073 560 ProSiteProfiles Zinc finger C3H1-type profile. 298 326 IPR000571 GO:0046872
Adu01g02073 560 PANTHER CWF19, CELL CYCLE CONTROL PROTEIN 157 559 IPR040194 -
Adu01g02073 560 Gene3D - 341 462 IPR036265 -
Adu01g02073 560 CDD MPP_CWF19_N 6 189 - -
Adu01g02073 560 PANTHER CWF19-LIKE PROTEIN 1 157 559 - -
Adu01g02073 560 SUPERFAMILY HIT-like 345 418 IPR036265 -
Adu01g02073 560 SMART c3hfinal6 300 325 IPR000571 GO:0046872
Adu01g02073 560 SMART c3hfinal6 266 293 IPR000571 GO:0046872
Adu01g02073 560 PANTHER CWF19, CELL CYCLE CONTROL PROTEIN 2 156 IPR040194 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Adu01g02073 CwfJ_C_1 9.9e-38 CL0265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02073 K24939 - gmx:100782106 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02073 01 87972848 87977076 Adu01g02073 01 87972848 87977076 ECH