Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02064 ATGATGCTATTGATTGTGACGGATGTTGCAGCTCATGGCATTGATATTTTGTTGCTTGATAATGTTATCAACTGGGACTTCCCTCCAAAGCCTAAGATATTCGTTCATCGTGTTGGGAGGGCTGCAAGGGCTGGCCATACTGGCACTGCTTATTCCTTCGTGACATCGGAGGATATGGCTTACCTATTGGATCTTCATTTGTTTCTGTCGAAGCCAATAAAAGCTGCTCCCACCGAAGAGGTCTTGCAGAATATGACTAGAGTAATGTCGAAAATTGAACAGACAATGGAAAATGGAGAAACTGTTTATGGCTGA 315 0.4317 MMLLIVTDVAAHGIDILLLDNVINWDFPPKPKIFVHRVGRAARAGHTGTAYSFVTSEDMAYLLDLHLFLSKPIKAAPTEEVLQNMTRVMSKIEQTMENGETVYG 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02064 104 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 86 IPR001650 -
Adu01g02064 104 CDD SF2_C_DEAD 3 54 - -
Adu01g02064 104 Gene3D - 2 103 IPR027417 -
Adu01g02064 104 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 79 IPR027417 -
Adu01g02064 104 Pfam Helicase conserved C-terminal domain 3 45 IPR001650 -
Adu01g02064 104 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 29 2 104 - -
Adu01g02064 104 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 2 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02064 Adu-Chr1 87785145 87785459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02064 3 77 Eukaryotic Initiation Factors Gene Family AT3G19760 41.333 7.73e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02064 K14808 - pvy:116117241 160.614