Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02052 ATGGTGCTGCTTGCTCACGCTGGAAGCGGTGGCGGCCAGGCTTGCTCACCGCCACAGTTCAACAAAGCTATTGCGGAAGAAAAACCAGTGGAAATGGTGAGAGTCAAATCAGAGCAAGTGACGTCTTCCTGCCGCTTCTTGCAGCAAAACGACGACGTTTCAAGCGACGAGTCTGATAAGAAGAAGAGCAACTCGGAAGTGACGGAAGAAGAAGAGCCTCGCGTCAAAGAGGAGGTTGCTGATGACGGCGCCGTTAACGTGTCGTCATCTTCGTCGTCGGTGGAGTTGCCGAAACCGATGGAAGGGCTTAACGAGGCGGGTCCGCCACCGTTTCTAAGGAAGACGTACGAGATGGTGGATGATCCGGAAACCGACCCGATTGTTTCGTGGAGCGAGAACCGCGATAGCTTCATCGTTTGGGAGTCTCACGAGTTCGCCAAAGTGCTTCTTCCAAAGTATTTCAAGCACAGCAACTTCTCCAGCTTCATTCGCCAGCTCAATACCTATGGCTTTAGGAAGGTTGATTCAGATCGTTGGGAGTTTGCAAACGAAGGATTCCAAGGAGGGAAGAAGCATTTGCTGAAGAACATAAGGAGGAGAAGCAAGTACAACAAACTGCATCAAGGAGCTTTCATCGACCCAGCTAAGCCTTGCCTTGAGGCTGAAGTTGAGAAGCTGAAGGAGGACCAAAACATACTCAAACTTGAAATTCTGAAGCTGAGACAACAGCAAGAAAGTTCCCACGTTCATATCTCAAGCGTTCAGGACCGGATTCAGAACGTCCAGACGAAGCAGTATCAGATGATATATTTCCTCACCAGAATGGCCAGAAAGCCAGCCTTTGTGGAACAGCTCCTCCAAAAGATTAAGAGGAAGAGGGAGCTCGATGGCACCGACATGCTCAAGAGGCGCAGATTGCTGGAACCAACGCCTAGTGTTGATTATAGATGCCAACAAGGTCATCAACAATTGTCTACATTGCAATCTGAACTTGATGGACTATTGTCTGAAAATGTGATGAGCACTAGCAATAAGATAGAGCAAACTGTTCCTTCTCCTCTGGAAGGTGAGTTATGCAACAAGGTACAAGGCTTGAGAAGCTATGGTTTTTCAAGGGGTGGTGATGTACCTTCTGCTTATCATGCCATGACAGAGAACCTATTGGGGGAAAATAATGGTGGTGCTGATGAAGAACTTGATGTGAATGACTCAAATATTTATCTTGAGTTGGAGGATTTGATTACTAAGCCAACAGATTGGGTTGGTTCTGCATCTGCATCTGCTGGTGGCTTGGTGGGGCAAACTAGTTGA 1311 0.4783 MVLLAHAGSGGGQACSPPQFNKAIAEEKPVEMVRVKSEQVTSSCRFLQQNDDVSSDESDKKKSNSEVTEEEEPRVKEEVADDGAVNVSSSSSSVELPKPMEGLNEAGPPPFLRKTYEMVDDPETDPIVSWSENRDSFIVWESHEFAKVLLPKYFKHSNFSSFIRQLNTYGFRKVDSDRWEFANEGFQGGKKHLLKNIRRRSKYNKLHQGAFIDPAKPCLEAEVEKLKEDQNILKLEILKLRQQQESSHVHISSVQDRIQNVQTKQYQMIYFLTRMARKPAFVEQLLQKIKRKRELDGTDMLKRRRLLEPTPSVDYRCQQGHQQLSTLQSELDGLLSENVMSTSNKIEQTVPSPLEGELCNKVQGLRSYGFSRGGDVPSAYHAMTENLLGENNGGADEELDVNDSNIYLELEDLITKPTDWVGSASASAGGLVGQTS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02052 436 MobiDBLite consensus disorder prediction 39 111 - -
Adu01g02052 436 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-9 80 417 - -
Adu01g02052 436 SUPERFAMILY "Winged helix" DNA-binding domain 107 200 IPR036390 -
Adu01g02052 436 SMART hsfneu3 107 200 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu01g02052 436 ProSitePatterns HSF-type DNA-binding domain signature. 150 174 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu01g02052 436 PRINTS Heat shock factor (HSF) domain signature 111 134 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu01g02052 436 PRINTS Heat shock factor (HSF) domain signature 149 161 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu01g02052 436 PRINTS Heat shock factor (HSF) domain signature 162 174 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu01g02052 436 MobiDBLite consensus disorder prediction 1 20 - -
Adu01g02052 436 MobiDBLite consensus disorder prediction 52 81 - -
Adu01g02052 436 Pfam HSF-type DNA-binding 111 200 IPR000232 GO:0003700|GO:0006355|GO:0043565
Adu01g02052 436 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 80 417 IPR027725 -
Adu01g02052 436 Gene3D - 104 201 IPR036388 -
Adu01g02052 436 Coils Coil 216 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02052 Adu-Chr1 87672017 87674479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02052 97 389 HSF AT2G26150 43.854 1.09e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Adu01g02052 HSF_DNA-bind 8.2e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02052 K09419 - gmx:100818430 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02052 01 87672017 87674479 Adu01g02052 01 87672017 87674479 ECH