Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02046 ATGTGCGGCGACGCAACCAACTGGGACGAAAATGCGTACAGGGAACGCCTCCTCAAGGAGAGGGAGATCCAAACCCGAACCGTTTTCCGTACGGCTTGGGCTCCTAGTCCCCGAAACCCTAATCCTCACTCTCTCGTCGTTGCTTCCAGCGACGGTTCTATCGCCTCCTACTCCATCCCTTCCTGCATCTCCAACCTCGTCAGTCACCACTCTCTTATCTCCCACCATCATTTATTATTGGCTGAACCAGATTGCTTCTTTCAAGGGCATGATGGACCTACATATGATGTCAAATTCTATGGTGATGGTGAAGATGCACTGTTGTTAAGTTGTGGAGATGATGGGTGGATTCGAGGATGGAGGTGGAAGGAACTTGCAAACTCAAATAGTGCTGTTTCTTCTCAAGGAAACAATATCAAACCCATACTTGACCTGGCAAATCCTCAACACAAAGGTCCTTGGGGTGCACTTTCACCTATCCCTGAGAATAATGCTATTGCTGTTAATTCTCAGGGGGGATCTGTTTTCTCTGCTTCTGGTGATTCTTGTGCATATTGTTGGGATGTGGAAACTGGTAAAGTGAAAATGGTATTTAAGGGGCACTTGGACTACTTGCACTGCATAGTTGCTCGCAACTCATCCAATCAGATCATAACTGGTTCAGAGGACAGGACTGCACGAATTTGGGATTGCAAAAGTGGAAAGTGTATCAAAGTGATTGATCCAGTAAAAGATTTGAACTTAAAAGGATCTGTTTCATGGGTTGGCTGTGTTGCATTAGATGCCAGTGAGAGCTGGTTGGCTTGCGGTAGTGGACGGAATATATCCCTTTGGAACCTTCCTGCCTCAGAGTGCTTATCAAGGATTTCAACTCGTGCTTCTGTACAGGACATACTATTTGACAGCAACCAAATTTTGGCAGTTGGTGCAGATCCTCTACTCAATCGCTTTGACATGAATGGTGCAATCCTTTCGCAAATACAGTGTGCTCCTGCATCAGCTTTCTCTGTCTCCTTACATCCTGCAGGGGTTGTGGCAGTTGGAGGTTATGGATGCCTTGTAGATGTTATCTCACAATTTGGTAGCCATATGTGCACATTCCATTGCAAGTGCATTTAA 1119 0.4584 MCGDATNWDENAYRERLLKEREIQTRTVFRTAWAPSPRNPNPHSLVVASSDGSIASYSIPSCISNLVSHHSLISHHHLLLAEPDCFFQGHDGPTYDVKFYGDGEDALLLSCGDDGWIRGWRWKELANSNSAVSSQGNNIKPILDLANPQHKGPWGALSPIPENNAIAVNSQGGSVFSASGDSCAYCWDVETGKVKMVFKGHLDYLHCIVARNSSNQIITGSEDRTARIWDCKSGKCIKVIDPVKDLNLKGSVSWVGCVALDASESWLACGSGRNISLWNLPASECLSRISTRASVQDILFDSNQILAVGADPLLNRFDMNGAILSQIQCAPASAFSVSLHPAGVVAVGGYGCLVDVISQFGSHMCTFHCKCI 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02046 372 Gene3D - 6 146 IPR015943 GO:0005515
Adu01g02046 372 ProSiteProfiles Trp-Asp (WD) repeats profile. 198 239 IPR001680 GO:0005515
Adu01g02046 372 SUPERFAMILY WD40 repeat-like 39 359 IPR036322 GO:0005515
Adu01g02046 372 SMART WD40_4 233 279 IPR001680 GO:0005515
Adu01g02046 372 SMART WD40_4 80 121 IPR001680 GO:0005515
Adu01g02046 372 SMART WD40_4 14 58 IPR001680 GO:0005515
Adu01g02046 372 SMART WD40_4 138 188 IPR001680 GO:0005515
Adu01g02046 372 SMART WD40_4 282 318 IPR001680 GO:0005515
Adu01g02046 372 SMART WD40_4 191 230 IPR001680 GO:0005515
Adu01g02046 372 SMART WD40_4 320 358 IPR001680 GO:0005515
Adu01g02046 372 Pfam WD domain, G-beta repeat 194 230 IPR001680 GO:0005515
Adu01g02046 372 Pfam WD domain, G-beta repeat 248 279 IPR001680 GO:0005515
Adu01g02046 372 Gene3D - 149 370 IPR015943 GO:0005515
Adu01g02046 372 PANTHER THO COMPLEX SUBUNIT 6 HOMOLOG 9 369 IPR042626 -
Adu01g02046 372 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 198 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02046 Adu-Chr1 87626584 87630756 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02046 166 235 Eukaryotic Initiation Factors Gene Family AT2G46280 34.286 2.04e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02046 K13175 K03257 gmx:100806423 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02046 01 87626584 87630756 Adu01g02046 01 87626584 87630756 ECH