Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02044 ATGGGTACCGCTACTGAGAAAGCCATTAGCATCGATCTCGGCACCACTTACAGCTGTGTGGCCGTGTGGCAGAACAATCGTATAGAGATCATCGCCAACGACCAAGGCAACCGAACCACTCCTTCCTACATTGCCTTCACGGACACCGAGCGCCTTATCGGAGATGCTACCAAGAACCAGGTGGCAATGAACCCACATAACACGGTGTTCGACGCCAAGCGCCTCATCGAAGCAGTTTGCATCCGAGGAGATTTCCTCCATGGTGCTCACCAAGATGAAGGAGATCGCCGAGGCCTACCTGGGAAAAACCATCAAGAACGCCATCATTACCGTCCCCACCTACTTCAACGACTCTTAGAGGCAGGCCACCAAGGACGCCGGTGCCATTGCAGGCCTCAACGTCATGAGAATTATCAACGAGCCAACCGCCGTTGCCTACGGCTTAGACAAGAAGGCCTCCAAAACTGGCGACAAGAACGTCCTCATCTTCGACCTCGGGGTGGCACCTTTGACGTGTCTCTGCTGACTATCGAGGAGGGCATCTTTGAGGTGAAGGTCACTGCCAGAGACACCCACTTGAGGGGCGAGGATTTCGACAACAGGCTGGTGAATCACTTCACGGCGGAGTTCAAGAGGAAGCACAAGAAGGACATGAGCAGCAATTCGAGAGTGCTCCGGAGACTAAGGACAGCGTGTGAGAGGGCCAAGAGGACACTCTCCTCCACCGCACAGATGACCATCGAGATCGACTTGCTCTTTGAAGGTATTGATTTCTACGCGACCATCACTCTGGCCAGGTTCGAGGAACTCAACATGGACCTATTCAGGAAGTGCATGGAGCTCGTTGAGAAGTGTCTCCGCAATGCCAAGGTTGATAAGGTTCAGATTCACGACATTGTCCTTGTTGGCGGCTCCACCAGAATCCCCAAGGTCCAGCAGCTTCTGCAGGACTTCTTGAACGGCAAGGAGCTCTGCAAGAGCATCAACCACGACGAGGCCATGGCTTACGGGGCTGCTGTTCAAGCTGCCATCCTGAGCGGCGAAGGCGACCAGAAAGTCCAAGACTTGCTTCTTCTCGACGTCACGCCCCTCAGCCTGGGCATTGAAACCGCCGGTGGGGTGATGACGGTCTTGATTCCCAAGAATACCACCATACCTACCAAGAAAGAGCAGGTGTTCTCCACCTACTCGGACAACCAGACCAGCGTGCTGATTCAGGTCATGAGGAACACCATCAAGGATGACAATGTTGGTGCCAAACTGGATCCTTCCGACAAGAAGAGGATCGAGAAGGCCGTTGATGACACCATCCAGTGGTTGGACGGGAACCAGTTGGCAGAAGTGGTGGTGGACACTGGTGGTGGTGGTTTTGCTCCATCCTCTGCCAATGCTGCCCATGACAACTCCGCTGGTGGACCTAATATTGAAGAGGTTGATTGA 1440 0.5396 MGTATEKAISIDLGTTYSCVAVWQNNRIEIIANDQGNRTTPSYIAFTDTERLIGDATKNQVAMNPHNTVFDAKRLIEAVCIRGDFLHGAHQDEGDRRGLPGKNHQERHHYRPHLLQRLLEAGHQGRRCHCRPQRHENYQRANRRCLRLRQEGLQNWRQERPHLRPRGGTFDVSLLTIEEGIFEVKVTARDTHLRGEDFDNRLVNHFTAEFKRKHKKDMSSNSRVLRRLRTACERAKRTLSSTAQMTIEIDLLFEGIDFYATITLARFEELNMDLFRKCMELVEKCLRNAKVDKVQIHDIVLVGGSTRIPKVQQLLQDFLNGKELCKSINHDEAMAYGAAVQAAILSGEGDQKVQDLLLLDVTPLSLGIETAGGVMTVLIPKNTTIPTKKEQVFSTYSDNQTSVLIQVMRNTIKDDNVGAKLDPSDKKRIEKAVDDTIQWLDGNQLAEVVVDTGGGGFAPSSANAAHDNSAGGPNIEEVD 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02044 479 ProSitePatterns Heat shock hsp70 proteins family signature 3. 299 313 IPR018181 -
Adu01g02044 479 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 404 447 IPR029048 -
Adu01g02044 479 Gene3D - 2 84 - -
Adu01g02044 479 ProSitePatterns Heat shock hsp70 proteins family signature 1. 11 18 IPR018181 -
Adu01g02044 479 SUPERFAMILY Actin-like ATPase domain 167 347 IPR043129 -
Adu01g02044 479 MobiDBLite consensus disorder prediction 458 479 - -
Adu01g02044 479 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 408 448 - -
Adu01g02044 479 SUPERFAMILY Actin-like ATPase domain 7 77 IPR043129 -
Adu01g02044 479 Gene3D Actin; Chain A, domain 4 195 277 - -
Adu01g02044 479 PANTHER HEAT SHOCK PROTEIN 70KDA 408 448 IPR013126 GO:0005524|GO:0140662
Adu01g02044 479 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 5 77 - -
Adu01g02044 479 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 167 407 - -
Adu01g02044 479 Pfam Hsp70 protein 9 76 IPR013126 GO:0005524|GO:0140662
Adu01g02044 479 Pfam Hsp70 protein 167 411 IPR013126 GO:0005524|GO:0140662
Adu01g02044 479 Gene3D - 167 325 - -
Adu01g02044 479 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 352 410 IPR029047 -
Adu01g02044 479 PANTHER HEAT SHOCK PROTEIN 70KDA 5 77 IPR013126 GO:0005524|GO:0140662
Adu01g02044 479 PANTHER HEAT SHOCK PROTEIN 70KDA 167 407 IPR013126 GO:0005524|GO:0140662
Adu01g02044 479 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 343 438 IPR029047 -
Adu01g02044 479 PRINTS 70kDa heat shock protein signature 168 178 - -
Adu01g02044 479 PRINTS 70kDa heat shock protein signature 355 374 - -
Adu01g02044 479 PRINTS 70kDa heat shock protein signature 296 312 - -
Adu01g02044 479 PRINTS 70kDa heat shock protein signature 328 348 - -
Adu01g02044 479 PRINTS 70kDa heat shock protein signature 35 47 - -
Adu01g02044 479 PRINTS 70kDa heat shock protein signature 7 20 - -
Adu01g02044 479 PRINTS 70kDa heat shock protein signature 57 65 - -
Adu01g02044 479 Gene3D - 326 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02044 Adu-Chr1 87539962 87541633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02044 408 479 Calmodulin-binding Proteins AT1G16030 41.935 4.66e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02044 K03283 - jre:108981403 511.531