Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g02042 ATGCTCATTGATGAACCAAAACTGCCTCAGCAAGGCCAAATCGCGGCCCTTCCTAATGAGTTCAACCCCAGTTATCTGAAAATATATTACAGTAAGCTGTTTCCTCATGCTGATTTATATAGATGGATGTCATACGGCAACGATGGGAAGCATCCTGCTTGTGATTCATCTTACTTGGGACGAAGGGAATTCTCGTACACCCTAGATAACGATATATTTGTGCGCTACAATACCTTCAATAGTGCCACCGAACTTGAAAACTCCATCAAAGACAAGTGCCCGTTAAAGATAGATATTGGACCCATCTACAACCTCAACCCTGCACATAGGAATGCTTATGCTGGAGATAATGTTCTCACTCCGGTTGAGAGGGAGCTGATTTTTGATATAGATATGTCAGATTATGATGATGTTAGATACTGCTGCTCAGGTGCTGATGTTTGTCTCAATTGCTGGCCATTAATGATTGTAGCTGTCAAAGTAATAGATACTTCCTTAAGAGATGACTTTGGGTTTAGACATATTCTCTGGGTATATAGTGGTCGGCGTGGTGTACATTGTTGGGTCTGTGATAGAAAGGCAAGACGGTTGACTAATGAGCAGAGAGCAGCAGTTGCGGACTATTTTCGTGTCTACAAGGGAAATGAAAATAACTATAAGAAGGTTTCCTTGATGGGTCAAGTTCTGCATCCCTTTCTGGCGAGATCATATACTGAAGTTCTCAAGGAATATTTTGAGACAAAACTGCTTACAAGTCAAAATTTACTTTCTAGCGAGGAGAGATATGAAAAGATCCTAGAGATGATTCCTGATCAATCTATTGCTTCTGAACTTCGAGGAAAGTGGCAAGAAAGTAGGCGGTCTTCTAGTGCAAAAGAAGACATTAATATTATTCGATGGGAGCAACTTAAACAGTTACTGCAAAAACATAAGGCACAAGGGGTGCGTAGGTGTGTTGAAGAGATTGTGTTCACCTATACATATCCTAGGCTTGATATGGAGGTTTCTAAACATATGAACCATTTGCTCAAAGCACCCTTCTGTGTGCACCCAAAAACAGGCCGTGTTTGTGTCCCCATCAACCCAAATAATTGTGAAGAATTTGATCCCACAACGGTGCCAACCCTTATCCAGCTTTTGGAAGAGCTGAATAGGGAGGGCTTGAGGTCTGATGTTGAAGGAGAATGGAATAAAACTTCACTTGCAAATGCCATCAAGCTCTTTAGGTCATCCTTCCTTCAGCCATTACTGAAAATTTGCAAGGAGGAAATGGAAAGCTCCTATAATGCGAAACTACAGCAGTCGAAGGATCTCCTTAGTTGGTAG 1326 0.4155 MLIDEPKLPQQGQIAALPNEFNPSYLKIYYSKLFPHADLYRWMSYGNDGKHPACDSSYLGRREFSYTLDNDIFVRYNTFNSATELENSIKDKCPLKIDIGPIYNLNPAHRNAYAGDNVLTPVERELIFDIDMSDYDDVRYCCSGADVCLNCWPLMIVAVKVIDTSLRDDFGFRHILWVYSGRRGVHCWVCDRKARRLTNEQRAAVADYFRVYKGNENNYKKVSLMGQVLHPFLARSYTEVLKEYFETKLLTSQNLLSSEERYEKILEMIPDQSIASELRGKWQESRRSSSAKEDINIIRWEQLKQLLQKHKAQGVRRCVEEIVFTYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPINPNNCEEFDPTTVPTLIQLLEELNREGLRSDVEGEWNKTSLANAIKLFRSSFLQPLLKICKEEMESSYNAKLQQSKDLLSW 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g02042 441 CDD AE_Prim_S 35 370 IPR014052 GO:0003896|GO:0006269
Adu01g02042 441 Gene3D DNA primase, PRIM domain 11 422 - -
Adu01g02042 441 PANTHER DNA PRIMASE SMALL SUBUNIT 32 441 IPR014052 GO:0003896|GO:0006269
Adu01g02042 441 SUPERFAMILY Prim-pol domain 21 385 - -
Adu01g02042 441 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 27 382 IPR014052 GO:0003896|GO:0006269
Adu01g02042 441 Pfam DNA primase small subunit 128 361 IPR002755 GO:0003896|GO:0006269
Adu01g02042 441 PANTHER DNA PRIMASE 32 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g02042 Adu-Chr1 87382753 87386556 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g02042 1 441 Core DNA Replication Machinery Family AT5G41880 64.350 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g02042 K02684 - tcc:18606689 708.368