Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01993 ATGAAGATGACATTGAGTTCCTTGTTCCTGAGTTGTTACAAGGGTGATCATTCTGATTACCCACAGTCTCCTAAGAAATCAAACAACAAAGTGGTGGCAACCAAGGGTCATAGTACTACTAGGAGCGGTTCTAACAGGGTTTCCGTTACCGATTTGAGTTTTCCAAGTGCTACCACGCTCTCTGAGGATCTCTCCATATCTCTAGCAGGGACCAACCTTTATGTCTTCTCACTCGCTGAACTCAAGATCATTACTCAGAGCTTCTCATCAAGTAACTTTCTTGGTGAAGGAGGCTTTGGACCTGTCCACAAAGGCTTCATTGATGATAAGGTAAGGCCTGGTCTCAAGGCTCAGCCTGTTGCTGTTAAGCTTTTGGATTTGGATGGAACTCAGGGCCACAAGGAGTGGTTGACTGAAGTTGTGTTTCTGGGTCAACTGAGTCACCCGCACCTTGTGAATTTGATTGGATACTGCTGTGAAGAGGAACATAGGCTTCTGGTGTATGAGTATTTACCACGAGGCAGCTTAGAGAATCAACTCTTTAGAAGATACTCTGCGTCATTGCCATGGTCAACAAGAATGAAGATTGCTGTTGGAGCAGCCAAAGGTCTATCCTTTCTCCATGAACAAAAGAAGCCAGTAATCTATAGAGATTTCAAGGCTTCAAACATCTTGTTAGACTCTGATTACAATGCAAAGCTATCTGATTTCGGGTTGGCAAAAGACGGGCCTGAAGGAGATGACACACACGTGTCAACACGAGTGATGGGGACACAAGGGTATGCAGCACCGGAATACGTGATGACAGGTCACTTGACAGCAATGAGTGACGTGTACAGCTTCGGAGTGGTGCTGTTGGAGATGCTGACAGGAAGAAGATCAGTGGACAAGGGGCGTCCATCAAGAGAACAGAATCTGGTGGAATGGGCGAGGCCTGCACTCAACGATTCAAGGAAGCTGGGGAGGATCATGGATCCAAGGCTGGAGGGACAGTACTCTGAGATGGGTGCAAAGAAAGCAGCAGCCTTGGCTTACCAGTGCCTCAGCCATAGGCCTAGGAACCGTCCTTCTATGCCCGCTGTCGTTAAGATTCTTGAGCCACTCCAGGACTATGATGATGTCCCCATTGGACCCTTTGTTTACACTGTTCCAAATCATGCTGATACCAATGCTACCACAGAAGCTCAAACTCCCAAGGAGAGGAAGAGGACTCACCACCATCACCACCGTAGGCATCCTCTCAAGTCGCCAAAGTCTTCACCAGATTCACACAATCATCATGCCACAACAAGTGCTTCTACTTCACCCGATGACAAATCCAATTAA 1326 0.4721 MKMTLSSLFLSCYKGDHSDYPQSPKKSNNKVVATKGHSTTRSGSNRVSVTDLSFPSATTLSEDLSISLAGTNLYVFSLAELKIITQSFSSSNFLGEGGFGPVHKGFIDDKVRPGLKAQPVAVKLLDLDGTQGHKEWLTEVVFLGQLSHPHLVNLIGYCCEEEHRLLVYEYLPRGSLENQLFRRYSASLPWSTRMKIAVGAAKGLSFLHEQKKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTAMSDVYSFGVVLLEMLTGRRSVDKGRPSREQNLVEWARPALNDSRKLGRIMDPRLEGQYSEMGAKKAAALAYQCLSHRPRNRPSMPAVVKILEPLQDYDDVPIGPFVYTVPNHADTNATTEAQTPKERKRTHHHHHRRHPLKSPKSSPDSHNHHATTSASTSPDDKSN 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01993 441 MobiDBLite consensus disorder prediction 22 44 - -
Adu01g01993 441 MobiDBLite consensus disorder prediction 384 441 - -
Adu01g01993 441 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 35 411 - -
Adu01g01993 441 Gene3D Phosphorylase Kinase; domain 1 50 170 - -
Adu01g01993 441 Gene3D Transferase(Phosphotransferase) domain 1 171 375 - -
Adu01g01993 441 MobiDBLite consensus disorder prediction 401 415 - -
Adu01g01993 441 PANTHER OS01G0588500 PROTEIN-RELATED 35 411 - -
Adu01g01993 441 CDD STKc_IRAK 94 368 - -
Adu01g01993 441 SUPERFAMILY Protein kinase-like (PK-like) 64 367 IPR011009 -
Adu01g01993 441 MobiDBLite consensus disorder prediction 17 44 - -
Adu01g01993 441 Pfam Protein tyrosine and serine/threonine kinase 92 364 IPR001245 GO:0004672|GO:0006468
Adu01g01993 441 ProSiteProfiles Protein kinase domain profile. 88 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g01993 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Adu01g01993 441 MobiDBLite consensus disorder prediction 423 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01993 Adu-Chr1 86901561 86903711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01993 76 403 Glycoside Hydrolase AT3G07070 50.000 2.23e-102 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Adu01g01993 PK_Tyr_Ser-Thr 3.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01993 - - gmx:100799411 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01993 01 86901561 86903711 Adu03g02256 03 47887193 47891282 PCT