Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01981 ATGTCCAGCTCATCGGAGTATTCTGGAGTTTCCGGCCAAAATCCGGTGAAGTCGCCGGAGATCTCCACGTTTTCCCAGACTTGTAATCGGTTGAGCCAATACCTCAGAGAAAACGGTTCCTTCGGTGACCTCACCCTCGGCATAACAAAACGCAACCCCGCCCCTGAAACACACGCAGGGTCACCTGAGAACTCATGCTATTCTGCAACAACCATGGAGTTATTTCCCACAAAGGAGAACAATAATGTGACAACCATGGATCTTCTTTATCCACGTGCTCCTGCTTATGCAAACACAAGGTATGCGTGTTTCTTGTTGCTTTTCATGCACCGCACCGTTTCTTTTCTGCGTTTAACAAAAGCGGAGGAGATTCTGTCCTTGGCTAAAAGAGGGAACTCTTGTGCATGCGCTTCTACGCAGCCCACCCGGCCTTACTTGTTTCAACCCCACTCCCAGCTACAGTCCGCACCTGTTGTTGGTGATCTACCTATTGCAAGGAAGGCTTCGCTGCATCGCTTCCTGGAGAAGAGAAAGGATAGAATTGCTTCAAAAGCACCATATCAAAGCAGCAGCCCCGTCTCGGTCCCTAATAAAGCAGCTGAGTCGTCTATGGCATGGCTTGGGTTAGGAGCTTAA 636 0.4953 MSSSSEYSGVSGQNPVKSPEISTFSQTCNRLSQYLRENGSFGDLTLGITKRNPAPETHAGSPENSCYSATTMELFPTKENNNVTTMDLLYPRAPAYANTRYACFLLLFMHRTVSFLRLTKAEEILSLAKRGNSCACASTQPTRPYLFQPHSQLQSAPVVGDLPIARKASLHRFLEKRKDRIASKAPYQSSSPVSVPNKAAESSMAWLGLGA 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01981 211 Pfam Jas motif 163 188 IPR018467 -
Adu01g01981 211 MobiDBLite consensus disorder prediction 1 22 - -
Adu01g01981 211 PANTHER PROTEIN TIFY 10A-LIKE 120 198 - -
Adu01g01981 211 PANTHER PROTEIN TIFY 10A-LIKE 17 82 - -
Adu01g01981 211 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 82 IPR040390 -
Adu01g01981 211 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 120 198 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01981 Adu-Chr1 86824824 86826185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01981 1 211 Tify Gene Family AT1G19180 35.547 1.19e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu01g01981 Jas_motif 1.6e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01981 K13464 - gmx:100527510 180.644
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01981 01 86824824 86826185 Adu01g01981 01 86824824 86826185 ECH
Adu01g01981 01 86824824 86826185 Adu03g02284 03 50037854 50040671 PCT