Home
Resource
Genome
JBrowse
Transcriptome
Metabolomics
Pan-genome
External database links
Search
Annotation
Pathway
Duplication type
Transposable elements
Regulatory proteins (RPs)
N6-methyladenosine (m6A)
Browse
Syn-based OGs
Gene-families
Synteny
Syn-Blocks
Syn-Dotplots
Deco-Alignments
Pvu_syntenic
Vvi_syntenic
WGDs- Genes
Anc-Genome
Anc-Reference
Tools
All tools
Genome browsing and annotation
Jbrowse
ShinyCircos
Interproscan
iTAK
Dupgen finder
Homology search and alignment
Bl-match
Seq-fatch
Blast
Diamond
Bi-visualazition
Synteny inference
MCScanX
ColinearScan
Synviso
Syn-blocks-stat
B-Dotter
BB-Dotter
BK-Dotter
Evaluation of nucleotide mutation
ParaAT
KaKs calculator
NG-KaKs-Cal
Paleogenome fractionation
Paleo-gene identifier
Syn-deco generator
Paleo-gene_RI
Paleo-gene_RII
P-index-calculator
Multi-syn-phytre
Gene structure and evolution
Codonw
Cpgfinder
MEME
GSDS
Hmmer
Pfam
FastTree
IQ-Tree2
Multigene-align
Heatmap
Lollipop
Gmapping
GF-Circos
Other auxiliary tools
GC-calculator
Seqlenth-calculator
Genstr-counter
Gam-Calculator
SAF-converter
BDI-finder
BDI-deduplicator
BDI-extractor
BDI-combiner
Seq-corrector
Subtree-splitter
Sptaxon-accessor
SS-extractor
WinO-WGDI
Block_run
KaKs calculate
Blast dotplot
Ks dotplot
Block_info
Correspondence
Statistics
Overview
Phylogenetic tree
Identification of polyploidy
Bar chart
Heatmap
Gene function annotation
Functional genes
Transcription factor
N6-methyladenosine(m6A)
Bar chart
Heatmap
Transposable elements
Documentation
Platform Manual
Pipeline flow examples
L-Wikipedia
Species introduce
Literatures
Common pests
Diseases
Economic value
Planting methods
About
Submission
Community
Contact
Gene search
Sequence information
Show
10
25
50
100
entries
Search:
Select
Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Adu01g01959
ATGGCTTCTTCTACGTCTTCTAAAGCCTCCCTTTTTCTCTTAGCAACAATCTTATTCTTCTCAAATGCTTGTGCTATCAGCAACCCCTCCAATGCAGAAAACCTCAATGCATTGAAATCCTTTTGCAGAACCACACCATACCCTGAAGTTTGCTTCAACTCATTGAAGCTATCAATCTCTATAACCATATCTCCAAGCATACTCAACAACCTCCTTCAGTCTCTCCAAGTAGCTATATCAGAAGCCACAAAGCTATCTGATCTTTTCAACAATGCTGGAAACTCAAACAGCATCATAGAGAATAAAATAGGAGCAGTTCAAGACTGCAAGGAGCTCCACAAACTCACATTGTCTTCTCTGAAACGCTCTCTATCCGCAATCCGTTCGCAGAACTCGAAGGACTTGGTTGATGCAAGAACATACCTTAGTGCAGCGTTAACCAACAAAGAAACGTGTTTAGAAAGCATGGAGTCAGCTTCTGGTACCCTTAAGCCAACTCTTGTGGATTCTGTGACCAACACTTTCAAATATGTCAGCAACACTCTCTCAATGCTCCCTCGTAAGCCTGATATGAAGAAGAAGCAGAAGAAGAGCACTCCAAAGTGGTTTTTTTCAAAATCAGATGATGAAGGGTATGATCCTAGTGAAGTGATTGTTGTGGCTGCAGATGGGAGTGGGAACTTTAGCACTATCAATGAAGCTGTTGACTTTGCTCCAAGTAATAGCTTTGACAGGACAGTGATATATGTGAAAGAAGGGTTATACGAGGAGAATGTGGAGATTCCAAGTCATAAGACCAATATTGTTTTGCTTGGAGATGGAAGAGATGCCACTGTCATCACTGGTAACAGAAGTTTTGTTGATGGCTGGACTACTTTTAGATCTGCCACTCTAGCTGTGTCTGGGGATGGTTTTCTGGCTCGAGACATAGCAATTGAGAACAAAGCGGGGCCAGAGAAGCATCAAGCAGTTGCACTGAGAGTTAATGCAGACTTGACTGCATTCTACAGATGTTCAATCTATGGCTATCAAGACACACTCTACACTCACTCCTTCAGACAATTCTACAGAGAAAGCGACATATATGGCACCATAGACTTCATATTCGGAAACGCGGCAGCGATCTTTCAAGGCTGCAACATTGTTTCACTAATGCCAATACCCGGCCAGTTTACGGTTATCACCGCGCAATCACGAAGTAGCCCTGATGAGGACACAGGGATCTCAATCCAGAACAGTTCAATTGTAGCAAGCACTGATTTGAGTTCAAATTCGACGATGGTCAAGAGTTACCTTGGGAGGCCATGGAGGGTGTATTCTCGCACTCTGTACATAGAGTCGTACATTGATAAGTTCATTGACCCGTTGGGATGGACAAAGTGGAACAATAATAATGATGGTGATACTGAAGGGCTTGAGACTCTGTATTATGGAGAGTATGAGAATTATGGGGGTGGTTCAGACACTCGTAACCGTGTTGATTGGCCAGGATTCCATTTGTTGGATTACAATGATGCTTATAACTTCACTGTTTCGGAGTTCATTGCAGGTGATGCTTGGCTTGGTTCTACTTCTTTTCCGTATGATGATGGGATTTGA
1599
0.4303
MASSTSSKASLFLLATILFFSNACAISNPSNAENLNALKSFCRTTPYPEVCFNSLKLSISITISPSILNNLLQSLQVAISEATKLSDLFNNAGNSNSIIENKIGAVQDCKELHKLTLSSLKRSLSAIRSQNSKDLVDARTYLSAALTNKETCLESMESASGTLKPTLVDSVTNTFKYVSNTLSMLPRKPDMKKKQKKSTPKWFFSKSDDEGYDPSEVIVVAADGSGNFSTINEAVDFAPSNSFDRTVIYVKEGLYEENVEIPSHKTNIVLLGDGRDATVITGNRSFVDGWTTFRSATLAVSGDGFLARDIAIENKAGPEKHQAVALRVNADLTAFYRCSIYGYQDTLYTHSFRQFYRESDIYGTIDFIFGNAAAIFQGCNIVSLMPIPGQFTVITAQSRSSPDEDTGISIQNSSIVASTDLSSNSTMVKSYLGRPWRVYSRTLYIESYIDKFIDPLGWTKWNNNNDGDTEGLETLYYGEYENYGGGSDTRNRVDWPGFHLLDYNDAYNFTVSEFIAGDAWLGSTSFPYDDGI
532
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Annotation information
Show
10
25
50
100
entries
Search:
Select
Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Adu01g01959
532
ProSitePatterns
Pectinesterase signature 2.
361
370
IPR033131
-
Adu01g01959
532
SUPERFAMILY
Pectin lyase-like
214
529
IPR011050
-
Adu01g01959
532
SUPERFAMILY
Plant invertase/pectin methylesterase inhibitor
37
185
IPR035513
-
Adu01g01959
532
Pfam
Pectinesterase
218
518
IPR000070
GO:0030599|GO:0042545
Adu01g01959
532
PANTHER
PECTINESTERASE
10
531
-
-
Adu01g01959
532
Pfam
Plant invertase/pectin methylesterase inhibitor
37
184
IPR006501
GO:0004857
Adu01g01959
532
PANTHER
PECTINESTERASE
10
531
-
-
Adu01g01959
532
CDD
PMEI-like_3
40
184
-
-
Adu01g01959
532
Gene3D
Invertase/pectin methylesterase inhibitor family protein
34
187
IPR035513
-
Adu01g01959
532
Gene3D
-
213
532
IPR012334
-
Showing 1 to 10 of 12 entries
Previous
1
2
Next
Select All
Download Selected Rows
Duplication type information
Show
10
25
50
100
entries
Search:
Select
Gene
Chromosome
Start
End
Duplicated_type
Adu01g01959
Adu-Chr1
86380955
86383206
Tandem
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Functional genes information
Show
10
25
50
100
entries
Search:
Select
Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Adu01g01959
29
532
Carbohydrate Esterase
AT2G26440
64.259
0.0
677
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Pathway information
Show
10
25
50
100
entries
Search:
Select
Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Adu01g01959
-
-
gmx:102665651
722.235
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Event-related genes
Show
10
25
50
100
entries
Search:
Select
Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Adu01g01959
01
86380955
86383206
Adu03g02122
03
41805398
41809548
PCT
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows