Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01959 ATGGCTTCTTCTACGTCTTCTAAAGCCTCCCTTTTTCTCTTAGCAACAATCTTATTCTTCTCAAATGCTTGTGCTATCAGCAACCCCTCCAATGCAGAAAACCTCAATGCATTGAAATCCTTTTGCAGAACCACACCATACCCTGAAGTTTGCTTCAACTCATTGAAGCTATCAATCTCTATAACCATATCTCCAAGCATACTCAACAACCTCCTTCAGTCTCTCCAAGTAGCTATATCAGAAGCCACAAAGCTATCTGATCTTTTCAACAATGCTGGAAACTCAAACAGCATCATAGAGAATAAAATAGGAGCAGTTCAAGACTGCAAGGAGCTCCACAAACTCACATTGTCTTCTCTGAAACGCTCTCTATCCGCAATCCGTTCGCAGAACTCGAAGGACTTGGTTGATGCAAGAACATACCTTAGTGCAGCGTTAACCAACAAAGAAACGTGTTTAGAAAGCATGGAGTCAGCTTCTGGTACCCTTAAGCCAACTCTTGTGGATTCTGTGACCAACACTTTCAAATATGTCAGCAACACTCTCTCAATGCTCCCTCGTAAGCCTGATATGAAGAAGAAGCAGAAGAAGAGCACTCCAAAGTGGTTTTTTTCAAAATCAGATGATGAAGGGTATGATCCTAGTGAAGTGATTGTTGTGGCTGCAGATGGGAGTGGGAACTTTAGCACTATCAATGAAGCTGTTGACTTTGCTCCAAGTAATAGCTTTGACAGGACAGTGATATATGTGAAAGAAGGGTTATACGAGGAGAATGTGGAGATTCCAAGTCATAAGACCAATATTGTTTTGCTTGGAGATGGAAGAGATGCCACTGTCATCACTGGTAACAGAAGTTTTGTTGATGGCTGGACTACTTTTAGATCTGCCACTCTAGCTGTGTCTGGGGATGGTTTTCTGGCTCGAGACATAGCAATTGAGAACAAAGCGGGGCCAGAGAAGCATCAAGCAGTTGCACTGAGAGTTAATGCAGACTTGACTGCATTCTACAGATGTTCAATCTATGGCTATCAAGACACACTCTACACTCACTCCTTCAGACAATTCTACAGAGAAAGCGACATATATGGCACCATAGACTTCATATTCGGAAACGCGGCAGCGATCTTTCAAGGCTGCAACATTGTTTCACTAATGCCAATACCCGGCCAGTTTACGGTTATCACCGCGCAATCACGAAGTAGCCCTGATGAGGACACAGGGATCTCAATCCAGAACAGTTCAATTGTAGCAAGCACTGATTTGAGTTCAAATTCGACGATGGTCAAGAGTTACCTTGGGAGGCCATGGAGGGTGTATTCTCGCACTCTGTACATAGAGTCGTACATTGATAAGTTCATTGACCCGTTGGGATGGACAAAGTGGAACAATAATAATGATGGTGATACTGAAGGGCTTGAGACTCTGTATTATGGAGAGTATGAGAATTATGGGGGTGGTTCAGACACTCGTAACCGTGTTGATTGGCCAGGATTCCATTTGTTGGATTACAATGATGCTTATAACTTCACTGTTTCGGAGTTCATTGCAGGTGATGCTTGGCTTGGTTCTACTTCTTTTCCGTATGATGATGGGATTTGA 1599 0.4303 MASSTSSKASLFLLATILFFSNACAISNPSNAENLNALKSFCRTTPYPEVCFNSLKLSISITISPSILNNLLQSLQVAISEATKLSDLFNNAGNSNSIIENKIGAVQDCKELHKLTLSSLKRSLSAIRSQNSKDLVDARTYLSAALTNKETCLESMESASGTLKPTLVDSVTNTFKYVSNTLSMLPRKPDMKKKQKKSTPKWFFSKSDDEGYDPSEVIVVAADGSGNFSTINEAVDFAPSNSFDRTVIYVKEGLYEENVEIPSHKTNIVLLGDGRDATVITGNRSFVDGWTTFRSATLAVSGDGFLARDIAIENKAGPEKHQAVALRVNADLTAFYRCSIYGYQDTLYTHSFRQFYRESDIYGTIDFIFGNAAAIFQGCNIVSLMPIPGQFTVITAQSRSSPDEDTGISIQNSSIVASTDLSSNSTMVKSYLGRPWRVYSRTLYIESYIDKFIDPLGWTKWNNNNDGDTEGLETLYYGEYENYGGGSDTRNRVDWPGFHLLDYNDAYNFTVSEFIAGDAWLGSTSFPYDDGI 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01959 532 ProSitePatterns Pectinesterase signature 2. 361 370 IPR033131 -
Adu01g01959 532 SUPERFAMILY Pectin lyase-like 214 529 IPR011050 -
Adu01g01959 532 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 185 IPR035513 -
Adu01g01959 532 Pfam Pectinesterase 218 518 IPR000070 GO:0030599|GO:0042545
Adu01g01959 532 PANTHER PECTINESTERASE 10 531 - -
Adu01g01959 532 Pfam Plant invertase/pectin methylesterase inhibitor 37 184 IPR006501 GO:0004857
Adu01g01959 532 PANTHER PECTINESTERASE 10 531 - -
Adu01g01959 532 CDD PMEI-like_3 40 184 - -
Adu01g01959 532 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 187 IPR035513 -
Adu01g01959 532 Gene3D - 213 532 IPR012334 -
Adu01g01959 532 SMART PMEI_2 33 184 IPR006501 GO:0004857
Adu01g01959 532 TIGRFAM PME_inhib: pectinesterase inhibitor domain 12 184 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01959 Adu-Chr1 86380955 86383206 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01959 29 532 Carbohydrate Esterase AT2G26440 64.259 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01959 - - gmx:102665651 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01959 01 86380955 86383206 Adu03g02122 03 41805398 41809548 PCT