Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01958 ATGGTTCTTTCTTCAACAAGAAAAGAGAAAAAGCCACCAATCATGGCACTCACCTTCTTGTTGATGCTTCTCCATGGACACTTCACTACTATGGCCTCTGCTTCTCGCACTCGTTTGGGAGGCTCAGCGTGCCTCAAGGTTTCACCTTCTGAGTTCGTCGGTGCTGTTAGGGAAGTTATTGGCCTCTTGGGAGATGTTGCTTCCATCTTGTCCAGGTTTAGCGGTGGCTTTGGTAATTTCCGTCTCGCCAACGCCATTCTTGACTGTCTTGATTTGTTGGACATGTCCTCCGACGAGCTTAACTGGTCTGTCTCCGCTACTCAAAACCCCAAAGGAAAAAACAACAGTACAGGAAACTTAGGATCCGATTTGAAGACATGGCTAAGTGCTGCCCTGGCAAATCCAGAGACATGCCTCGATGGATTCGAAGGCACAAGCAGTATCGTGAAAGGATTAGTCTCCAGCGGCCTTGGACAAGTGACATCGCTGGTGAAGAATCTCCTTGCAAAGGTTGATGTCCCCCACCATGATGTCTCCCACAGTGCCGGCGTGGACCAGTTTCCTTCGTGGGTGAAGCCGGGGGAGAGGAAGCTTCTGCAGGCAAATGGAGTGGCTGCCGATGCTGTGGTGGCTTTAGATGGAAGTGGAAAGTTCACAAGGGTGATGGATGCGATTATGGCTGCGCCGGATTATAGCATGAAGAGGTTTGTGATTTACGTGAAGAGAGGTGTTTACAATGAGAACGTGGAGATTAAGAAGAAGAAGTGGAATATCATGATGATCGGAGATGGTATCGGTGCCACTGTTATTACCGGCAACCGGAGTGTTGTTGACGGCTGGACAACTTTCCGATCTGCCACCTTTGCTGTAAGTGGAAGAGGATTCATAGCACGAGACATTACTTTTCAGAACACAGCAGGACCAGAGAAGCACCAAGCAGTGGCACTAAGATCCGATTCCGACCTCTCAGTCTTCTTCCGTTGTGGAATCTTGGGCTACCAAGACAGCCTCTACACTCACACAATGCGTCAATTCTTCAGAGAGTGCACAATCTCCGGCACAGTCGATTTCATCTTTGGCGATGCAACCGCAGTCTTCCAAAAATGCAATGTACTTGTCAAGAAAGGGTTACAGAATCAAAAGAACACAATCACCGCACAAGGTAGAAAAGATCCTAATGAACCAACAGGATTCTCGTTACAATTCTGCAACGTAACTGCTGATTCTGACCTAGTTTCTTTTGTTAACACCACGGAGACTTTCTTGGGGAGGCCGTGGAAAACGTATTCAAGAACCATTTTTATGCAAAATTATATGAGCGAGATTATAAGGCCGCAAGGGTGGTTAGAGTGGAACGGTAACTTTGCGTTGGATACACTATATTATGCTGAGTATATGAATACTGGTGCCGGTGCAGGTTTAGCTAACAGAGTCAAATGGCCCGGATACCATGTTTTGAATAGCTCCAGTGAAGCTAGCAATTTTACTGTCGCACAGTTCATTCAAGGAAATTTATGGTTGCCTTCAACTGGTGTAGCATTCACAGCTGGATTAACGCTTTAA 1563 0.4683 MVLSSTRKEKKPPIMALTFLLMLLHGHFTTMASASRTRLGGSACLKVSPSEFVGAVREVIGLLGDVASILSRFSGGFGNFRLANAILDCLDLLDMSSDELNWSVSATQNPKGKNNSTGNLGSDLKTWLSAALANPETCLDGFEGTSSIVKGLVSSGLGQVTSLVKNLLAKVDVPHHDVSHSAGVDQFPSWVKPGERKLLQANGVAADAVVALDGSGKFTRVMDAIMAAPDYSMKRFVIYVKRGVYNENVEIKKKKWNIMMIGDGIGATVITGNRSVVDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVALRSDSDLSVFFRCGILGYQDSLYTHTMRQFFRECTISGTVDFIFGDATAVFQKCNVLVKKGLQNQKNTITAQGRKDPNEPTGFSLQFCNVTADSDLVSFVNTTETFLGRPWKTYSRTIFMQNYMSEIIRPQGWLEWNGNFALDTLYYAEYMNTGAGAGLANRVKWPGYHVLNSSSEASNFTVAQFIQGNLWLPSTGVAFTAGLTL 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01958 520 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 65 169 IPR035513 -
Adu01g01958 520 Gene3D - 204 520 IPR012334 -
Adu01g01958 520 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 173 IPR035513 -
Adu01g01958 520 PANTHER PECTINESTERASE 47 518 - -
Adu01g01958 520 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 47 518 - -
Adu01g01958 520 Pfam Plant invertase/pectin methylesterase inhibitor 84 169 IPR006501 GO:0004857
Adu01g01958 520 ProSitePatterns Pectinesterase signature 2. 351 360 IPR033131 -
Adu01g01958 520 SMART PMEI_2 35 170 IPR006501 GO:0004857
Adu01g01958 520 ProSitePatterns Pectinesterase signature 1. 232 251 IPR018040 -
Adu01g01958 520 SUPERFAMILY Pectin lyase-like 204 517 IPR011050 -
Adu01g01958 520 Pfam Pectinesterase 207 504 IPR000070 GO:0030599|GO:0042545
Adu01g01958 520 CDD PMEI-like_4 17 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01958 Adu-Chr1 86369016 86372429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01958 16 518 Carbohydrate Esterase AT3G43270 64.603 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01958 K01051 - gmx:100814987 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01958 01 86369016 86372429 Adu03g02346 03 55454899 55459147 PCT