Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01933 ATGGCATCATCAAGCTCGTACAATTCACCTTGCGCTGCCTGCAAATTCTTGAGGAGGAAGTGCATGCCAGGGTGTATCTTTGCGCCTTATTTTCCACCCGAAGAGCCTCAAAAGTTTGCAAACGTGCACAAGATCTTCGGTGCAAGCAATGTTACCAAGCTCCTCAACGAGCTTCTGCCTCATCAAAGGGAGGATGCGGTCAACTCCCTCGCTTATGAGGCAGAAGCTCGCGTGAGAGATCCTGTTTACGGCTGCGTTGGCGCCATATCATTCCTCCAAAGACAAGTCCAAAGACTTCAGAAAGAACTTGATGCCGCCAACGCCGATCTTCTCCGCTATTCCTTTACTGACATCGCTCCGACGCCGGCTCTTTCTATGCCTCCCGGACTAACCAATGCTACTTCCCTTCAACAAATTCCCCAAAGGTTTGGGGCAAGATTTGATAACGAAGGAAGTGGATTCTATAACAATAATCGCCAATATTCACCTAATATTTATTCTTACCCTTACTCTCTTCCCTGGACCGATACCTCTTCCAAGGATATCAGCGATGGGGGCGGGTTAGGTGACGGCGATGGGAGAGGAGGTAATTTGTGA 597 0.4891 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRYSFTDIAPTPALSMPPGLTNATSLQQIPQRFGARFDNEGSGFYNNNRQYSPNIYSYPYSLPWTDTSSKDISDGGGLGDGDGRGGNL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01933 198 Coils Coil 89 109 - -
Adu01g01933 198 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 186 - -
Adu01g01933 198 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Adu01g01933 198 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Adu01g01933 198 PANTHER ELONGATED PETIOLULE 1 1 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01933 Adu-Chr1 85112532 85113421 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01933 1 119 AS2 family AT5G63090 90.833 1.21e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Adu01g01933 LOB 3.3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01933 - - ahf:112722314 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01933 01 85112532 85113421 Adu01g01933 01 85112532 85113421 ECH