Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01917 ATGGCTTCACCGTCTCCATCAATGGAAAGAAGGGTTGCCGGTGATGAAGATACCACTTGGGGCGAAGCAGACCATGGAGTTGGATCGGTTGAGGGCGAAGGCTTTGCAGGGTTGGAATCATACGAGTACGATTTACAGGAAGATGAAACAAAAAATGACCATCCGGTTGAGGGCGAACGCTATGCAGGGATGGAGTCAGACGAGAACGACTTTCAGGAAGACGATACAGAACACGACCGTCATGCAGAGGCCGATGTCGACAATGGGGATGCGGTTGAATTGGAAGACGGTTTAGACGGCGCCAGAGGAATGTCTGAGAATTATGCGGAAGACGAGTTTTACGCCGTTGATTCCGCCGAGTCCATAGGTTGGATTGATTTTTTGAACCTGAGCGCGGAGGATGTTCTCCGGTTTAATTTCGCAGATGTTGACATTGCATTTGAGTTCTATCAGCAATATGCAAAGCACCATGGATTCGGCGCGAGACGTTCCAGAAGCGGAAAACGCGGCGAATTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTTCCAATCCCCGAAGTTCTACTCGATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCTCTGCAAGGATGTTACTCCGCATGGACGATGAATCAGGACGTTGGCACGTTGCGTTCTTTTCAGATGCGCATAACCACCACGTTCTTGAGTTGCGATTTTCTTCCATGCTCCCGGGCCATCGGAGGATGAGCGAAGCGGACATCCAGCAGATGAACGACATGCGCAAAGGGGGCATTGGCGTCTCCCGAATCCATGGTTTTATGGCGAGCCTGGCCGGCGGGTATCATAATGTCCCGTACACAACAAGGGACATGCACAATGTAAATGCGAAGCAACGAAGGGAGGGTGGCCTAGATGCGGAATCGTGCTTGAGCTACACTGAGTTTTTACGTCATTTCCGTCGATGCTTGATGTTCGTCCGCGCAAAGGAGGTGGAGGCCGATTTCGAGTGCGCAAAGGGTGACCCTGTTATGACCACCAACCTGAAACAGCTGGAGCGGAGTGCAGCCGACAACTACACTCGTGCGATATTCTATTTGTTTGTTCCCATTCTTGACAGGGCCTGTGTAATGAGGGTGGTTGACTCTGAAGACAACGGTTCCTATTTTATTCACACCGTCTCTCGATACGGCACTCCGGGGAAGGAGTGGCGTGTTGTTGCGACGTCTGATACGAGGGAGGTCCGATGCACGTGCATGAGAATGGAATGTTTCGGGGTCCCCTGCGAACATATAATTGCGGTGCTTGTTCTTAACAATGTTCATGAGATCCCGAGGTCTCTGATATTACCGAGATGGACCAAGGATGCAAAACTTGTGGCGGTGGAGTCGATGGGCGTGATTTGGGATTCTGTACAACTGACGCAACACTGGTGCCTGATGGATTGGTACCGGAAAGTGTGCAAGATTGCATGTCACAGCACCGAAAAGTTCCAGTTTGCAAGAGACATAGCTGTGCTGATGCTGAAGCACTTCGAGAACGAAGATGCAGGGAACAGCAGTTTTCAACAGGAGGGGCCACCTACGGAGGGTGGCAGACCCCCGGCGCGAAATCCACCCAGGCGCAATACAAAGGGTAACTGTGCTCATGGTGGAAAGAAGACCCAGCGATGTCGTTTGTGCCGGGAGGTGGGACACAACAGGACGACGTGTCCGGAGTGTCACACCATGGAACCATCCAGCTCAGTTGCAGAAGACATGGATTCGATGGACACTGACATGGTCTATAATAACCTATCCGGCGATCTGTATGCGACCGCGGAGATTCCTTCGTTCAAATGCTCCGATAGTGACACGCATGCCGGGTTTGCTAATAGCGACTTCGCTGGGACCAAGACGTCCGGGCCAGTCATGTCTCTCGCCGATTGA 1932 0.5233 MASPSPSMERRVAGDEDTTWGEADHGVGSVEGEGFAGLESYEYDLQEDETKNDHPVEGERYAGMESDENDFQEDDTEHDRHAEADVDNGDAVELEDGLDGARGMSENYAEDEFYAVDSAESIGWIDFLNLSAEDVLRFNFADVDIAFEFYQQYAKHHGFGARRSRSGKRGELRIRQEFVCHRQGFQSPKFYSMPNRQKRPRAETRCGCSARMLLRMDDESGRWHVAFFSDAHNHHVLELRFSSMLPGHRRMSEADIQQMNDMRKGGIGVSRIHGFMASLAGGYHNVPYTTRDMHNVNAKQRREGGLDAESCLSYTEFLRHFRRCLMFVRAKEVEADFECAKGDPVMTTNLKQLERSAADNYTRAIFYLFVPILDRACVMRVVDSEDNGSYFIHTVSRYGTPGKEWRVVATSDTREVRCTCMRMECFGVPCEHIIAVLVLNNVHEIPRSLILPRWTKDAKLVAVESMGVIWDSVQLTQHWCLMDWYRKVCKIACHSTEKFQFARDIAVLMLKHFENEDAGNSSFQQEGPPTEGGRPPARNPPRRNTKGNCAHGGKKTQRCRLCREVGHNRTTCPECHTMEPSSSVAEDMDSMDTDMVYNNLSGDLYATAEIPSFKCSDSDTHAGFANSDFAGTKTSGPVMSLAD 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01917 643 Pfam FAR1 DNA-binding domain 148 237 IPR004330 -
Adu01g01917 643 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 137 272 IPR031052 GO:0006355
Adu01g01917 643 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 312 526 IPR031052 GO:0006355
Adu01g01917 643 PANTHER OS03G0181600 PROTEIN 312 526 - -
Adu01g01917 643 MobiDBLite consensus disorder prediction 1 84 - -
Adu01g01917 643 PANTHER OS03G0181600 PROTEIN 137 272 - -
Adu01g01917 643 ProSiteProfiles Zinc finger SWIM-type profile. 405 441 IPR007527 GO:0008270
Adu01g01917 643 MobiDBLite consensus disorder prediction 44 67 - -
Adu01g01917 643 MobiDBLite consensus disorder prediction 518 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01917 Adu-Chr1 83341533 83344377 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu01g01917 FAR1 1.2e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01917 - - adu:107493880 657.907