Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01888 ATGGTGGCAAGATCATGCATCAATTTGTTGGACTTGGTGCCAAGGGAAGTTTTAAATTTCCCTCAAACTCATCGAGCTCTTCGGCGAGTTATGACAGTTCCAAGAACATTTTCTGATGTAGATGGCAAAAGAAGGGATGATGATGATGATGATGATGAAGCGGAGGATTATTCAAATACTTTCTCATCAGAATGCAACCAAAAGATAATCATAGTAGCAAATTTTCTTCCAATCAATGCTGAAAAGGACAAAAAAACCGGCAGATGGTGTTTTACTTATGATGAAGGTTCTATTTTGTGGCAGTTAAAAGATTCTATCTCTTCTGAAACAGATGTTTTTTACGTGGGATCTTTGAAGGCCGATGAAGATGCTAGCGAACAAGATAAAGTCATGGAGGTCATTAATCCAGAACAGGATTATGTGTGGGTTCATAATTATCATCTTATGGTTCTTCCAACATTTCTGCGAAGGCGTTGTAATAAGATCAAGCTAGGATACTTCCTTCATAGTCCATTTCCTTCATCAGAAATCAATAGGACTTTACCTGTTAGAGATGAAATTTTGAAAGCATTACTCAATTCAGATTTAATTGGCTTTCATACATTTGATTACGCACGCCATTTTCTTTCGTGTTGTAGTCGAATTCTTGGCTTAAAGTCTGAATCTAAAAGGGGTTACATTGAGCTTGAATACTTTGGCCGTATAATATGCATTAAAAGTTTGCTAGTGGGGATTCATGTGGGTTGGCTTCAATCTGCATTAGACCACTCTTCTTCTTTAGTCAAAGCCAGAGAAATCTACAAGAAATTTAAGGGTAAGAAACTTGTTCTTGGTGTTGATGATATGGACATATTCAAAGGTATCAGTCTAAAGCTCTTGGCAATGGAAGAACTCCTTCAGCAGTATCCGGAATTTCAGGGTGAATTTGTGCTTGTCCAGATTGTCAAGGAAGCGCAGAAGGAGACATATATTACTGCTAATAGGATAAACAAAAGGTTTGGTTTTGCTGGTTACCAACCTGTGATCATCATTGATCATCCTATTCCTGTGTATGAGAAGATTTCTTACGTTGCTTTGGCAGATTGTTGCGTTGTGAATGCGGTAAGAGATGGTATGAATTTGATTCCATATGAGTATGTAGTGTGTAGGCAGGGGAGTTCTAAAATGGATGAAGCTCTAGAACTTGATCCTGATTCTCCACATACAAGTGCACTTGTAGTTTCCGAATTCATGGACTGCTCGCCATCTCTTGGTAGTGCAATCCGGGTGAATCCATGGGACATCAATGGTGTAGCTAATGCAATGAATTTGGCCATCAAAATGCCAAGTGGAGAGCAACAGTTGCGACACAATAAGCACTATCGATATGTTAAGTCTCATGATTTAGCTTACTGGAGCAGAAGTTTTATGCGGCATCTAGAACACTCTTGTAAGGATCATTTTAGGAATCGTTGCTGGGGAATGGGGTTTGGTCTGAGTTTTAGAGTCTTGTCCCTTTCTCCAAGTTTCAGGAAGGTTTCGAATTACAACATTGTCTCAGCATATAGAAGGACTAGTTGCAGGGTAATTTTTCTGGATTATGATGGTACAATTGTGCCTCATTCCTCTGTTGTTAAACTCCCGTCATAG 1629 0.391 MVARSCINLLDLVPREVLNFPQTHRALRRVMTVPRTFSDVDGKRRDDDDDDDEAEDYSNTFSSECNQKIIIVANFLPINAEKDKKTGRWCFTYDEGSILWQLKDSISSETDVFYVGSLKADEDASEQDKVMEVINPEQDYVWVHNYHLMVLPTFLRRRCNKIKLGYFLHSPFPSSEINRTLPVRDEILKALLNSDLIGFHTFDYARHFLSCCSRILGLKSESKRGYIELEYFGRIICIKSLLVGIHVGWLQSALDHSSSLVKAREIYKKFKGKKLVLGVDDMDIFKGISLKLLAMEELLQQYPEFQGEFVLVQIVKEAQKETYITANRINKRFGFAGYQPVIIIDHPIPVYEKISYVALADCCVVNAVRDGMNLIPYEYVVCRQGSSKMDEALELDPDSPHTSALVVSEFMDCSPSLGSAIRVNPWDINGVANAMNLAIKMPSGEQQLRHNKHYRYVKSHDLAYWSRSFMRHLEHSCKDHFRNRCWGMGFGLSFRVLSLSPSFRKVSNYNIVSAYRRTSCRVIFLDYDGTIVPHSSVVKLPS 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01888 542 CDD GT20_TPS 128 474 IPR001830 GO:0003824|GO:0005992
Adu01g01888 542 MobiDBLite consensus disorder prediction 38 59 - -
Adu01g01888 542 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 128 542 IPR001830 GO:0003824|GO:0005992
Adu01g01888 542 Gene3D Glycogen Phosphorylase B; 126 259 - -
Adu01g01888 542 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 68 478 - -
Adu01g01888 542 Gene3D Glycogen Phosphorylase B; 260 459 - -
Adu01g01888 542 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 1 130 - -
Adu01g01888 542 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 128 542 - -
Adu01g01888 542 Pfam Glycosyltransferase family 20 128 474 IPR001830 GO:0003824|GO:0005992
Adu01g01888 542 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 130 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01888 Adu-Chr1 81463607 81466068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01888 128 542 Trehalose Biosynthesis Gene Families AT1G23870 65.882 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01888 K16055 - gmx:100812031 634.024