Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01881 ATGCCTCCGCCATCACTCTCTCTTTCGGAACTCCCACCATGGCAGCAGATCCGTCAACTGAACCGCCTCGATAATCTTCTTCAGCGCCTTCAACTTCCGTTGCTTCGTCCAGTCCCATCAACCTCGCCACCAAAGCCGGTGAGCGACTCTCCGCGGTCGGTGATTGAGGCTTTGTCGCACGAGATCGGCGAATCTCCACGGGGAGGACCTTCTCCTACTCTGGTCAAGGCTGAGGTGCCATGGTCCACTAGAAGGGGAAATCTCTCTGAAAAGGATAGTGTCCTGAAGACTTTTAAAGGAATACTAAATAAGTTGACTCCTAAGAAATTTGACCTTCTAAAGGGTCAGTTGATTGATGCAGGCATAACATCAGCTGACATACTCAAGCGGGTCATTTCGCTTATATTTGATAAGGCAGTGCTAGAGCCAACATTTTGCCCCATGTATGCTCAGCTCTGTTTTAATCTTAATGAAAATATGCCTCCTTTCCCATCAGATGAACCTGGTGGGAAAGAAATCACTTTTAAGCGAGTACTCTTGAATATCTGCCAGGAGGCATTTGAGGGTGCAGATAAGTTGAGGGTAGAATTTAGGCAAATGACTTCTCCTGATCAAGAGATGGAGCGCCGTGACAAGGAGAGACTGTCAAGCTTCGAGCTTCTAGGACCTCCTAACAGCAAGATGTGTCCAGCTGAGGAAAATGTTGAAGCTATATGTCAATTTTTCAACACCATTGGTGCTACTGCAAGTATCAGAAATCCCCGTGGTGTAGTTTTTGGTGTTCTTGGAAATACCAACCCTGGGGGATTCCCCATTGCCCGACCTGGCATTAGGGGATTGATGCCTGGGATGCCTGGGATGCCTGGGACAAGGAAGATGCCTGGGATGCCTGGAATTGATAATGACAATTGA 912 0.4792 MPPPSLSLSELPPWQQIRQLNRLDNLLQRLQLPLLRPVPSTSPPKPVSDSPRSVIEALSHEIGESPRGGPSPTLVKAEVPWSTRRGNLSEKDSVLKTFKGILNKLTPKKFDLLKGQLIDAGITSADILKRVISLIFDKAVLEPTFCPMYAQLCFNLNENMPPFPSDEPGGKEITFKRVLLNICQEAFEGADKLRVEFRQMTSPDQEMERRDKERLSSFELLGPPNSKMCPAEENVEAICQFFNTIGATASIRNPRGVVFGVLGNTNPGGFPIARPGIRGLMPGMPGMPGTRKMPGMPGIDNDN 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01881 303 Gene3D - 86 222 - -
Adu01g01881 303 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 246 303 IPR045208 GO:0003743
Adu01g01881 303 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 219 246 - -
Adu01g01881 303 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 62 222 - -
Adu01g01881 303 SUPERFAMILY ARM repeat 88 247 IPR016024 -
Adu01g01881 303 SMART if4_15 95 303 IPR003890 GO:0003723|GO:0005515
Adu01g01881 303 Pfam MIF4G domain 96 214 IPR003890 GO:0003723|GO:0005515
Adu01g01881 303 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 219 246 IPR045208 GO:0003743
Adu01g01881 303 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 62 222 IPR045208 GO:0003743
Adu01g01881 303 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 246 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01881 Adu-Chr1 80942500 80944530 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01881 246 303 Eukaryotic Initiation Factors Gene Family AT5G57870 59.322 9.04e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01881 K03260 - gmx:100781275 308.531