Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01878 ATGGGTGAAAGGTGTGACTTTCTTAAAGAAATCTCCACAAAAAGAGCAGATTGGATCATTAAGGTTTATGTTGTAAGGATGTGGTATGGTCCTCCACGACCAAATAGTAGTGAAGTTGGTGCTTTAGAGATTGCATTGCATGACTCGAAGCAGGATACACTGCATGATTCCAAAATCAGTGATGTGCTAGCAGAGGTTATAGGAAAGGAAGATCCAAAGGATTTAGTTACCAAGCAAGGGCAGGAAAGCAAGCAGTTAGGGTTGTTAGTGGAGGACTTTGAGAAGAATTCTATTAGTTGTACCCTATTTGGTTTACTGGTGGACTTGATACAACCCTATTTAGATGGTGATAAGGCTGAACCTCTCATAGTTGCATTCCAACTATTTAGAGCAAAGGAATGGAATGGGAAGATTAGTATTCAGAGTAGTTTTGACACATCTAACATCCACATAAATCCCAATATTAAGGAGGCCGAAGTTGGATTTAAATGGATACTATGTACGATTTTTGACTTTGACGTCGGGAGGAATGATTGGTTCTTCATAGCTTGCAAGTATTGTCATAAAAAATGCAAAAAGATAGAGGAGAGGTTTGAATGTGACCATTGCCGCAAGAAGGCCGTTCAGGTAGACTTGAAGTATAAGCTTCAAGCTTATGTTTCTAATGCAACTGGAAGTATGTGTGTAGTGTTATGGGATACCGAAGCAAGCCAAATTATAGGGTTGCGTGCAACCAAAGTCAGAGAAAGCTACAGTCAGGATGATTCTGATGATTCTTACCCGGAAGTACTGAAGACGGCCTTGGACATGAAGTTGCTATTAAGGATTAATGTGAAAGGTAGTAATTTGAGTGGTAATGAGAATGTTTATAATGTCACAAAAGCATGCCTTGATGAGCACCTTATCCATAAATACAGCCAGTCTGTAAATGAACAATCTGTGGAGGGGTTGGATAATGTTACTAGCTTGGATTGTACTACTGATGTTGTTTATCTTGGTGATGATGAATCTGTCCAAGGTGGACAGACAGTTACCAGCGGCAAGGGAAGAGCTAAAAGGATTGATACAAGAATTATAGGAGTAGTTGTGAAAGACTTGGAGAGTATAGCCATAGGGCAGTTGTCAAGAACTAAGAAGCCAAGGTTGAGTATTAAGAAAGAAAAGAACCTCTAG 1173 0.3973 MGERCDFLKEISTKRADWIIKVYVVRMWYGPPRPNSSEVGALEIALHDSKQDTLHDSKISDVLAEVIGKEDPKDLVTKQGQESKQLGLLVEDFEKNSISCTLFGLLVDLIQPYLDGDKAEPLIVAFQLFRAKEWNGKISIQSSFDTSNIHINPNIKEAEVGFKWILCTIFDFDVGRNDWFFIACKYCHKKCKKIEERFECDHCRKKAVQVDLKYKLQAYVSNATGSMCVVLWDTEASQIIGLRATKVRESYSQDDSDDSYPEVLKTALDMKLLLRINVKGSNLSGNENVYNVTKACLDEHLIHKYSQSVNEQSVEGLDNVTSLDCTTDVVYLGDDESVQGGQTVTSGKGRAKRIDTRIIGVVVKDLESIAIGQLSRTKKPRLSIKKEKNL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01878 390 SUPERFAMILY Nucleic acid-binding proteins 157 295 IPR012340 -
Adu01g01878 390 Pfam Replication factor-A C terminal domain 176 287 IPR013955 -
Adu01g01878 390 SUPERFAMILY Nucleic acid-binding proteins 57 165 IPR012340 -
Adu01g01878 390 Gene3D - 132 306 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01878 Adu-Chr1 80606439 80610499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01878 147 278 Core DNA Replication Machinery Family AT5G08020 28.571 9.16e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01878 - - ahf:112716567 553.518